Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HIST1H1AQ02539 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 PMPCAP1-201ENST00000508114 1576 ntBASIC12.82□□□□□ -0.36
HIST1H1AQ02539 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 RNF146-204ENST00000476956 884 ntTSL 2 BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 KRT18P35-201ENST00000510488 1269 ntBASIC12.82□□□□□ -0.36
HIST1H1AQ02539 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST1H1AQ02539 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 RNF216P1-203ENST00000404404 2427 ntBASIC12.81□□□□□ -0.36
HIST1H1AQ02539 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 AC148477.5-201ENST00000625164 1645 ntBASIC12.81□□□□□ -0.36
HIST1H1AQ02539 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 COPS8-203ENST00000409334 794 ntTSL 5 BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 S100A2-206ENST00000497140 697 ntTSL 2 BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 MPI-205ENST00000562606 1052 ntTSL 3 BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 MIR3180-1-201ENST00000580374 94 ntBASIC12.81□□□□□ -0.36
HIST1H1AQ02539 MIR3180-3-201ENST00000584616 94 ntBASIC12.81□□□□□ -0.36
HIST1H1AQ02539 GZMM-202ENST00000592501 941 ntTSL 3 BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 FRMD8P1-201ENST00000440433 1524 ntBASIC12.81□□□□□ -0.36
HIST1H1AQ02539 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 AC097637.2-201ENST00000624096 1997 ntBASIC12.81□□□□□ -0.36
HIST1H1AQ02539 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms