Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC13.04□□□□□ -0.32
RAB5BP61020 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC13.04□□□□□ -0.32
RAB5BP61020 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB5BP61020 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.04□□□□□ -0.32
RAB5BP61020 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
RAB5BP61020 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB5BP61020 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.04□□□□□ -0.32
RAB5BP61020 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.04□□□□□ -0.32
RAB5BP61020 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB5BP61020 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RAB5BP61020 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC13.04□□□□□ -0.32
RAB5BP61020 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB5BP61020 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
RAB5BP61020 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB5BP61020 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB5BP61020 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
RAB5BP61020 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB5BP61020 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB5BP61020 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RAB5BP61020 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
RAB5BP61020 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.04□□□□□ -0.32
RAB5BP61020 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.04□□□□□ -0.32
RAB5BP61020 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB5BP61020 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB5BP61020 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB5BP61020 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RAB5BP61020 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RAB5BP61020 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RAB5BP61020 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB5BP61020 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB5BP61020 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.03□□□□□ -0.32
RAB5BP61020 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB5BP61020 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB5BP61020 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB5BP61020 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB5BP61020 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
RAB5BP61020 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB5BP61020 AC013726.1-201ENST00000563747 2285 ntBASIC13.03□□□□□ -0.32
RAB5BP61020 AK1-201ENST00000223836 736 ntTSL 3 BASIC13.03□□□□□ -0.32
RAB5BP61020 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB5BP61020 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB5BP61020 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
RAB5BP61020 MIR149-201ENST00000384879 89 ntBASIC13.03□□□□□ -0.32
RAB5BP61020 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.03□□□□□ -0.32
RAB5BP61020 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.03□□□□□ -0.32
RAB5BP61020 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB5BP61020 AL121832.2-201ENST00000610979 668 ntBASIC13.03□□□□□ -0.32
RAB5BP61020 BID-214ENST00000617586 542 ntTSL 5 BASIC13.03□□□□□ -0.32
RAB5BP61020 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB5BP61020 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB5BP61020 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB5BP61020 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB5BP61020 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RAB5BP61020 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC13.03□□□□□ -0.32
RAB5BP61020 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB5BP61020 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.03□□□□□ -0.32
RAB5BP61020 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB5BP61020 KRT8P50-201ENST00000562022 1438 ntBASIC13.03□□□□□ -0.32
RAB5BP61020 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB5BP61020 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC13.03□□□□□ -0.32
RAB5BP61020 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
RAB5BP61020 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB5BP61020 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB5BP61020 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB5BP61020 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB5BP61020 AL031595.1-201ENST00000623969 4709 ntBASIC13.03□□□□□ -0.32
RAB5BP61020 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB5BP61020 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB5BP61020 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RAB5BP61020 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAB5BP61020 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAB5BP61020 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.02□□□□□ -0.32
RAB5BP61020 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAB5BP61020 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAB5BP61020 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAB5BP61020 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAB5BP61020 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAB5BP61020 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
RAB5BP61020 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
RAB5BP61020 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAB5BP61020 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
RAB5BP61020 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
RAB5BP61020 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB5BP61020 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
RAB5BP61020 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB5BP61020 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
RAB5BP61020 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RAB5BP61020 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC13.02□□□□□ -0.33
RAB5BP61020 SLC25A1P3-201ENST00000395415 828 ntBASIC13.02□□□□□ -0.33
RAB5BP61020 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB5BP61020 LSM12P1-201ENST00000411836 588 ntBASIC13.02□□□□□ -0.33
RAB5BP61020 KRT18P11-201ENST00000435214 1283 ntBASIC13.02□□□□□ -0.33
RAB5BP61020 RHOD-202ENST00000532559 538 ntTSL 3 BASIC13.02□□□□□ -0.33
RAB5BP61020 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.02□□□□□ -0.33
RAB5BP61020 AL139246.5-201ENST00000606645 996 ntBASIC13.02□□□□□ -0.33
RAB5BP61020 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB5BP61020 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB5BP61020 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.02□□□□□ -0.33
RAB5BP61020 CRK-204ENST00000574295 1391 ntTSL 5 BASIC13.02□□□□□ -0.33
RAB5BP61020 AC027612.1-201ENST00000445234 2395 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms