Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACLYP53396 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.16■□□□□ 0.5
ACLYP53396 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
ACLYP53396 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACLYP53396 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ACLYP53396 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACLYP53396 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ACLYP53396 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.16■□□□□ 0.5
ACLYP53396 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACLYP53396 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.15■□□□□ 0.5
ACLYP53396 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACLYP53396 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACLYP53396 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.15■□□□□ 0.5
ACLYP53396 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.15■□□□□ 0.5
ACLYP53396 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACLYP53396 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ACLYP53396 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACLYP53396 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACLYP53396 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACLYP53396 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACLYP53396 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACLYP53396 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ACLYP53396 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.15■□□□□ 0.5
ACLYP53396 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ACLYP53396 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
ACLYP53396 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.15■□□□□ 0.5
ACLYP53396 AC093726.1-201ENST00000608064 963 ntBASIC18.15■□□□□ 0.5
ACLYP53396 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ACLYP53396 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.15■□□□□ 0.5
ACLYP53396 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.15■□□□□ 0.5
ACLYP53396 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.15■□□□□ 0.5
ACLYP53396 AC134043.2-201ENST00000624206 2238 ntBASIC18.15■□□□□ 0.5
ACLYP53396 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.15■□□□□ 0.5
ACLYP53396 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ACLYP53396 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.15■□□□□ 0.5
ACLYP53396 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.15■□□□□ 0.5
ACLYP53396 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.14■□□□□ 0.5
ACLYP53396 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ACLYP53396 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACLYP53396 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACLYP53396 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACLYP53396 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACLYP53396 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACLYP53396 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACLYP53396 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.14■□□□□ 0.49
ACLYP53396 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACLYP53396 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ACLYP53396 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
ACLYP53396 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACLYP53396 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.14■□□□□ 0.49
ACLYP53396 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACLYP53396 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACLYP53396 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.14■□□□□ 0.49
ACLYP53396 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ACLYP53396 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACLYP53396 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
ACLYP53396 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.14■□□□□ 0.49
ACLYP53396 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.14■□□□□ 0.49
ACLYP53396 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.14■□□□□ 0.49
ACLYP53396 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.14■□□□□ 0.49
ACLYP53396 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.14■□□□□ 0.49
ACLYP53396 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.14■□□□□ 0.49
ACLYP53396 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACLYP53396 AC119751.2-201ENST00000504529 210 ntBASIC18.14■□□□□ 0.49
ACLYP53396 AC092658.1-201ENST00000505836 891 ntBASIC18.14■□□□□ 0.49
ACLYP53396 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.14■□□□□ 0.49
ACLYP53396 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.14■□□□□ 0.49
ACLYP53396 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.14■□□□□ 0.49
ACLYP53396 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.14■□□□□ 0.49
ACLYP53396 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.14■□□□□ 0.49
ACLYP53396 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.14■□□□□ 0.49
ACLYP53396 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.14■□□□□ 0.49
ACLYP53396 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACLYP53396 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ACLYP53396 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
ACLYP53396 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACLYP53396 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ACLYP53396 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.14■□□□□ 0.49
ACLYP53396 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
ACLYP53396 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACLYP53396 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACLYP53396 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACLYP53396 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.14■□□□□ 0.49
ACLYP53396 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.14■□□□□ 0.49
ACLYP53396 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACLYP53396 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
ACLYP53396 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACLYP53396 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACLYP53396 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ACLYP53396 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
ACLYP53396 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ACLYP53396 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ACLYP53396 CROCCP2-202ENST00000412962 2773 ntBASIC18.13■□□□□ 0.49
ACLYP53396 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
ACLYP53396 PCDHB17P-201ENST00000539533 2393 ntBASIC18.13■□□□□ 0.49
ACLYP53396 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.13■□□□□ 0.49
ACLYP53396 AC092068.3-201ENST00000587894 2016 ntBASIC18.13■□□□□ 0.49
ACLYP53396 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
ACLYP53396 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
ACLYP53396 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms