Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.8□□□□□ -0.04
SLC25A1P53007 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SLC25A1P53007 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC25A1P53007 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC25A1P53007 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC25A1P53007 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC25A1P53007 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC25A1P53007 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC25A1P53007 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC25A1P53007 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC25A1P53007 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLC25A1P53007 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC25A1P53007 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC25A1P53007 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC25A1P53007 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC25A1P53007 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC25A1P53007 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC25A1P53007 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC25A1P53007 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC25A1P53007 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SLC25A1P53007 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SLC25A1P53007 AC073621.1-201ENST00000392730 636 ntBASIC14.79□□□□□ -0.04
SLC25A1P53007 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SLC25A1P53007 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC25A1P53007 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SLC25A1P53007 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
SLC25A1P53007 AC105917.1-201ENST00000506637 2539 ntBASIC14.79□□□□□ -0.04
SLC25A1P53007 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.79□□□□□ -0.04
SLC25A1P53007 AF238378.1-201ENST00000526806 358 ntBASIC14.79□□□□□ -0.04
SLC25A1P53007 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC25A1P53007 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.79□□□□□ -0.04
SLC25A1P53007 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC25A1P53007 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.79□□□□□ -0.04
SLC25A1P53007 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC25A1P53007 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.79□□□□□ -0.04
SLC25A1P53007 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SLC25A1P53007 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.79□□□□□ -0.04
SLC25A1P53007 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SLC25A1P53007 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC25A1P53007 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC25A1P53007 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC25A1P53007 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SLC25A1P53007 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC25A1P53007 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SLC25A1P53007 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SLC25A1P53007 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.79□□□□□ -0.04
SLC25A1P53007 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SLC25A1P53007 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC25A1P53007 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC25A1P53007 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC25A1P53007 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.78□□□□□ -0.04
SLC25A1P53007 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC25A1P53007 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC25A1P53007 REXO1L8P-201ENST00000604378 1897 ntBASIC14.78□□□□□ -0.04
SLC25A1P53007 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC25A1P53007 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC25A1P53007 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SLC25A1P53007 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.78□□□□□ -0.04
SLC25A1P53007 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SLC25A1P53007 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC25A1P53007 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SLC25A1P53007 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SLC25A1P53007 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC25A1P53007 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC25A1P53007 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SLC25A1P53007 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.78□□□□□ -0.04
SLC25A1P53007 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC25A1P53007 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC25A1P53007 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC25A1P53007 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC25A1P53007 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.78□□□□□ -0.04
SLC25A1P53007 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC25A1P53007 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC25A1P53007 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC25A1P53007 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC25A1P53007 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.78□□□□□ -0.04
SLC25A1P53007 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.78□□□□□ -0.04
SLC25A1P53007 IGHV3-65-201ENST00000523210 341 ntBASIC14.78□□□□□ -0.04
SLC25A1P53007 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.78□□□□□ -0.04
SLC25A1P53007 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC25A1P53007 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.78□□□□□ -0.04
SLC25A1P53007 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.78□□□□□ -0.04
SLC25A1P53007 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SLC25A1P53007 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC25A1P53007 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.78□□□□□ -0.04
SLC25A1P53007 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SLC25A1P53007 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC25A1P53007 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC25A1P53007 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC25A1P53007 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC25A1P53007 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.78□□□□□ -0.04
SLC25A1P53007 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC25A1P53007 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.78□□□□□ -0.04
SLC25A1P53007 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.78□□□□□ -0.04
SLC25A1P53007 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SLC25A1P53007 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SLC25A1P53007 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SLC25A1P53007 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC25A1P53007 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SLC25A1P53007 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms