Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.19■□□□□ 0.02
HMGA2P52926 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGA2P52926 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.19■□□□□ 0.02
HMGA2P52926 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGA2P52926 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGA2P52926 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
HMGA2P52926 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGA2P52926 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGA2P52926 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGA2P52926 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGA2P52926 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGA2P52926 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HMGA2P52926 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
HMGA2P52926 AC087641.1-201ENST00000557561 1021 ntBASIC15.19■□□□□ 0.02
HMGA2P52926 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HMGA2P52926 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HMGA2P52926 AP001350.2-201ENST00000625104 1094 ntBASIC15.19■□□□□ 0.02
HMGA2P52926 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.19■□□□□ 0.02
HMGA2P52926 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.19■□□□□ 0.02
HMGA2P52926 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGA2P52926 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGA2P52926 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGA2P52926 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGA2P52926 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGA2P52926 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGA2P52926 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGA2P52926 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGA2P52926 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.19■□□□□ 0.02
HMGA2P52926 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HMGA2P52926 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HMGA2P52926 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.19■□□□□ 0.02
HMGA2P52926 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.19■□□□□ 0.02
HMGA2P52926 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGA2P52926 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.18■□□□□ 0.02
HMGA2P52926 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HMGA2P52926 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.18■□□□□ 0.02
HMGA2P52926 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HMGA2P52926 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.18■□□□□ 0.02
HMGA2P52926 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.18■□□□□ 0.02
HMGA2P52926 PI4KAP1-204ENST00000612579 1703 ntBASIC15.18■□□□□ 0.02
HMGA2P52926 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGA2P52926 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGA2P52926 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HMGA2P52926 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGA2P52926 HYMAI-201ENST00000635591 3347 ntBASIC15.18■□□□□ 0.02
HMGA2P52926 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
HMGA2P52926 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
HMGA2P52926 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGA2P52926 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGA2P52926 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGA2P52926 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGA2P52926 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HMGA2P52926 ATP5G2P1-201ENST00000433580 426 ntBASIC15.18■□□□□ 0.02
HMGA2P52926 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGA2P52926 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.18■□□□□ 0.02
HMGA2P52926 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.18■□□□□ 0.02
HMGA2P52926 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.18■□□□□ 0.02
HMGA2P52926 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.18■□□□□ 0.02
HMGA2P52926 AC107918.2-201ENST00000530817 355 ntBASIC15.18■□□□□ 0.02
HMGA2P52926 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.18■□□□□ 0.02
HMGA2P52926 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.18■□□□□ 0.02
HMGA2P52926 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGA2P52926 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.18■□□□□ 0.02
HMGA2P52926 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
HMGA2P52926 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGA2P52926 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGA2P52926 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGA2P52926 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGA2P52926 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.18■□□□□ 0.02
HMGA2P52926 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
HMGA2P52926 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HMGA2P52926 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HMGA2P52926 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
HMGA2P52926 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
HMGA2P52926 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.17■□□□□ 0.02
HMGA2P52926 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGA2P52926 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGA2P52926 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.17■□□□□ 0.02
HMGA2P52926 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.17■□□□□ 0.02
HMGA2P52926 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
HMGA2P52926 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
HMGA2P52926 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGA2P52926 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.17■□□□□ 0.02
HMGA2P52926 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HMGA2P52926 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGA2P52926 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
HMGA2P52926 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGA2P52926 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HMGA2P52926 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.17■□□□□ 0.02
HMGA2P52926 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGA2P52926 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGA2P52926 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGA2P52926 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.17■□□□□ 0.02
HMGA2P52926 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HMGA2P52926 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
HMGA2P52926 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGA2P52926 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGA2P52926 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HMGA2P52926 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.17■□□□□ 0.02
HMGA2P52926 HCG4-201ENST00000418983 998 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms