Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CSNK1A1P48729 SNX33P1-201ENST00000592116 1762 ntBASIC14.83□□□□□ -0.03
CSNK1A1P48729 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CSNK1A1P48729 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1A1P48729 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.83□□□□□ -0.04
CSNK1A1P48729 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.83□□□□□ -0.04
CSNK1A1P48729 AC079328.2-201ENST00000561241 3354 ntBASIC14.83□□□□□ -0.04
CSNK1A1P48729 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.83□□□□□ -0.04
CSNK1A1P48729 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.83□□□□□ -0.04
CSNK1A1P48729 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1A1P48729 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1A1P48729 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.83□□□□□ -0.04
CSNK1A1P48729 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.83□□□□□ -0.04
CSNK1A1P48729 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.83□□□□□ -0.04
CSNK1A1P48729 AC096734.2-201ENST00000562054 433 ntBASIC14.83□□□□□ -0.04
CSNK1A1P48729 AC034105.1-201ENST00000563488 319 ntBASIC14.83□□□□□ -0.04
CSNK1A1P48729 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.83□□□□□ -0.04
CSNK1A1P48729 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1A1P48729 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.83□□□□□ -0.04
CSNK1A1P48729 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.83□□□□□ -0.04
CSNK1A1P48729 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.83□□□□□ -0.04
CSNK1A1P48729 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.83□□□□□ -0.04
CSNK1A1P48729 BX640515.1-201ENST00000617215 977 ntBASIC14.83□□□□□ -0.04
CSNK1A1P48729 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.83□□□□□ -0.04
CSNK1A1P48729 AC010507.1-201ENST00000633895 436 ntBASIC14.83□□□□□ -0.04
CSNK1A1P48729 AL645728.2-201ENST00000641974 660 ntBASIC14.83□□□□□ -0.04
CSNK1A1P48729 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1A1P48729 AL671710.1-201ENST00000610245 2349 ntBASIC14.83□□□□□ -0.04
CSNK1A1P48729 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1A1P48729 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.83□□□□□ -0.04
CSNK1A1P48729 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1A1P48729 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1A1P48729 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CSNK1A1P48729 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CSNK1A1P48729 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1A1P48729 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.83□□□□□ -0.04
CSNK1A1P48729 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1A1P48729 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1A1P48729 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.83□□□□□ -0.04
CSNK1A1P48729 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1A1P48729 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CSNK1A1P48729 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.83□□□□□ -0.04
CSNK1A1P48729 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
CSNK1A1P48729 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CSNK1A1P48729 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1A1P48729 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
CSNK1A1P48729 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1A1P48729 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1A1P48729 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1A1P48729 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1A1P48729 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1A1P48729 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1A1P48729 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1A1P48729 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.82□□□□□ -0.04
CSNK1A1P48729 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1A1P48729 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CSNK1A1P48729 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
CSNK1A1P48729 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.82□□□□□ -0.04
CSNK1A1P48729 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1A1P48729 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.82□□□□□ -0.04
CSNK1A1P48729 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1A1P48729 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1A1P48729 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1A1P48729 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.82□□□□□ -0.04
CSNK1A1P48729 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.82□□□□□ -0.04
CSNK1A1P48729 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.82□□□□□ -0.04
CSNK1A1P48729 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1A1P48729 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.82□□□□□ -0.04
CSNK1A1P48729 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.82□□□□□ -0.04
CSNK1A1P48729 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.82□□□□□ -0.04
CSNK1A1P48729 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.82□□□□□ -0.04
CSNK1A1P48729 AC064836.3-201ENST00000607928 673 ntBASIC14.82□□□□□ -0.04
CSNK1A1P48729 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.82□□□□□ -0.04
CSNK1A1P48729 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1A1P48729 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.82□□□□□ -0.04
CSNK1A1P48729 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.82□□□□□ -0.04
CSNK1A1P48729 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.82□□□□□ -0.04
CSNK1A1P48729 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1A1P48729 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1A1P48729 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1A1P48729 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.82□□□□□ -0.04
CSNK1A1P48729 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1A1P48729 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.82□□□□□ -0.04
CSNK1A1P48729 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.82□□□□□ -0.04
CSNK1A1P48729 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1A1P48729 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.82□□□□□ -0.04
CSNK1A1P48729 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.82□□□□□ -0.04
CSNK1A1P48729 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CSNK1A1P48729 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1A1P48729 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1A1P48729 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CSNK1A1P48729 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1A1P48729 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1A1P48729 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.81□□□□□ -0.04
CSNK1A1P48729 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.81□□□□□ -0.04
CSNK1A1P48729 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1A1P48729 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.81□□□□□ -0.04
CSNK1A1P48729 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1A1P48729 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1A1P48729 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms