Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 MIR4651-201ENST00000582622 73 ntBASIC16.76■□□□□ 0.27
MDH1P40925 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.76■□□□□ 0.27
MDH1P40925 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MDH1P40925 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.76■□□□□ 0.27
MDH1P40925 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
MDH1P40925 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.76■□□□□ 0.27
MDH1P40925 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
MDH1P40925 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MDH1P40925 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.76■□□□□ 0.27
MDH1P40925 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.76■□□□□ 0.27
MDH1P40925 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MDH1P40925 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.76■□□□□ 0.27
MDH1P40925 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.76■□□□□ 0.27
MDH1P40925 AL512652.2-201ENST00000625156 1716 ntBASIC16.76■□□□□ 0.27
MDH1P40925 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MDH1P40925 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.76■□□□□ 0.27
MDH1P40925 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.76■□□□□ 0.27
MDH1P40925 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MDH1P40925 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.75■□□□□ 0.27
MDH1P40925 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MDH1P40925 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.75■□□□□ 0.27
MDH1P40925 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
MDH1P40925 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.75■□□□□ 0.27
MDH1P40925 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MDH1P40925 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.75■□□□□ 0.27
MDH1P40925 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
MDH1P40925 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MDH1P40925 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MDH1P40925 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MDH1P40925 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MDH1P40925 AP000525.1-201ENST00000608286 694 ntBASIC16.75■□□□□ 0.27
MDH1P40925 AL049637.2-201ENST00000641778 930 ntBASIC16.75■□□□□ 0.27
MDH1P40925 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
MDH1P40925 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
MDH1P40925 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MDH1P40925 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.75■□□□□ 0.27
MDH1P40925 CICP4-201ENST00000447359 2812 ntBASIC16.75■□□□□ 0.27
MDH1P40925 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
MDH1P40925 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
MDH1P40925 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.75■□□□□ 0.27
MDH1P40925 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MDH1P40925 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MDH1P40925 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.75■□□□□ 0.27
MDH1P40925 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MDH1P40925 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MDH1P40925 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
MDH1P40925 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
MDH1P40925 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
MDH1P40925 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MDH1P40925 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MDH1P40925 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MDH1P40925 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
MDH1P40925 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.74■□□□□ 0.27
MDH1P40925 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.74■□□□□ 0.27
MDH1P40925 AL031731.1-201ENST00000642131 2094 ntBASIC16.74■□□□□ 0.27
MDH1P40925 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
MDH1P40925 SNX33P1-201ENST00000592116 1762 ntBASIC16.74■□□□□ 0.27
MDH1P40925 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
MDH1P40925 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.74■□□□□ 0.27
MDH1P40925 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MDH1P40925 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.74■□□□□ 0.27
MDH1P40925 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MDH1P40925 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MDH1P40925 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.74■□□□□ 0.27
MDH1P40925 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MDH1P40925 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
MDH1P40925 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MDH1P40925 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
MDH1P40925 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MDH1P40925 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.74■□□□□ 0.27
MDH1P40925 HLA-F-220ENST00000434407 884 ntBASIC16.74■□□□□ 0.27
MDH1P40925 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.74■□□□□ 0.27
MDH1P40925 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.74■□□□□ 0.27
MDH1P40925 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.74■□□□□ 0.27
MDH1P40925 RASA4DP-201ENST00000460726 1199 ntBASIC16.74■□□□□ 0.27
MDH1P40925 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MDH1P40925 GCSHP2-201ENST00000560971 527 ntBASIC16.74■□□□□ 0.27
MDH1P40925 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.74■□□□□ 0.27
MDH1P40925 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.74■□□□□ 0.27
MDH1P40925 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
MDH1P40925 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MDH1P40925 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.74■□□□□ 0.27
MDH1P40925 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MDH1P40925 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.74■□□□□ 0.27
MDH1P40925 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.74■□□□□ 0.27
MDH1P40925 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.74■□□□□ 0.27
MDH1P40925 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MDH1P40925 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MDH1P40925 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MDH1P40925 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MDH1P40925 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MDH1P40925 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MDH1P40925 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MDH1P40925 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.74■□□□□ 0.27
MDH1P40925 AC104581.4-201ENST00000623126 3052 ntBASIC16.73■□□□□ 0.27
MDH1P40925 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
MDH1P40925 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MDH1P40925 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MDH1P40925 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MDH1P40925 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms