Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GDF1P27539 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.08■□□□□ 0
GDF1P27539 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
GDF1P27539 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
GDF1P27539 KRT8P39-201ENST00000396270 1433 ntBASIC15.08■□□□□ 0
GDF1P27539 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GDF1P27539 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.07■□□□□ 0
GDF1P27539 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.07■□□□□ 0
GDF1P27539 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
GDF1P27539 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GDF1P27539 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.07■□□□□ 0
GDF1P27539 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
GDF1P27539 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.07■□□□□ 0
GDF1P27539 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GDF1P27539 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
GDF1P27539 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
GDF1P27539 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
GDF1P27539 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.07■□□□□ 0
GDF1P27539 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.07■□□□□ 0
GDF1P27539 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.07■□□□□ 0
GDF1P27539 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
GDF1P27539 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GDF1P27539 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
GDF1P27539 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GDF1P27539 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GDF1P27539 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.07■□□□□ 0
GDF1P27539 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.07■□□□□ 0
GDF1P27539 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.07■□□□□ 0
GDF1P27539 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
GDF1P27539 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.07■□□□□ 0
GDF1P27539 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.07■□□□□ 0
GDF1P27539 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.07■□□□□ 0
GDF1P27539 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
GDF1P27539 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.07■□□□□ 0
GDF1P27539 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
GDF1P27539 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.07■□□□□ 0
GDF1P27539 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.07■□□□□ 0
GDF1P27539 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.07■□□□□ 0
GDF1P27539 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
GDF1P27539 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.07■□□□□ 0
GDF1P27539 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
GDF1P27539 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
GDF1P27539 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
GDF1P27539 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.07■□□□□ 0
GDF1P27539 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.07■□□□□ 0
GDF1P27539 KRT8P23-201ENST00000560090 1207 ntBASIC15.07■□□□□ 0
GDF1P27539 AC093520.2-201ENST00000561830 333 ntBASIC15.07■□□□□ 0
GDF1P27539 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.07■□□□□ 0
GDF1P27539 AC027307.2-201ENST00000591252 911 ntBASIC15.07■□□□□ 0
GDF1P27539 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.07■□□□□ 0
GDF1P27539 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
GDF1P27539 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GDF1P27539 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
GDF1P27539 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GDF1P27539 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.07■□□□□ 0
GDF1P27539 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GDF1P27539 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
GDF1P27539 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GDF1P27539 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.06■□□□□ 0
GDF1P27539 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.06■□□□□ 0
GDF1P27539 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GDF1P27539 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
GDF1P27539 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GDF1P27539 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GDF1P27539 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
GDF1P27539 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
GDF1P27539 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
GDF1P27539 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.06■□□□□ 0
GDF1P27539 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
GDF1P27539 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GDF1P27539 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
GDF1P27539 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GDF1P27539 AL139400.1-201ENST00000366220 510 ntBASIC15.06■□□□□ 0
GDF1P27539 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.06■□□□□ 0
GDF1P27539 AL645939.2-201ENST00000427340 991 ntBASIC15.06■□□□□ 0
GDF1P27539 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.06■□□□□ 0
GDF1P27539 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
GDF1P27539 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.06■□□□□ 0
GDF1P27539 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.06■□□□□ 0
GDF1P27539 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.06■□□□□ 0
GDF1P27539 AC025678.2-201ENST00000562061 970 ntBASIC15.06■□□□□ 0
GDF1P27539 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.06■□□□□ 0
GDF1P27539 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.06■□□□□ 0
GDF1P27539 AC008267.7-201ENST00000624570 1194 ntBASIC15.06■□□□□ 0
GDF1P27539 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.06■□□□□ 0
GDF1P27539 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.06■□□□□ 0
GDF1P27539 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.06■□□□□ 0
GDF1P27539 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GDF1P27539 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.06■□□□□ 0
GDF1P27539 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.06■□□□□ 0
GDF1P27539 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
GDF1P27539 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GDF1P27539 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
GDF1P27539 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.06■□□□□ 0
GDF1P27539 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.06■□□□□ 0
GDF1P27539 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GDF1P27539 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.06■□□□□ 0
GDF1P27539 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.06■□□□□ 0
GDF1P27539 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
GDF1P27539 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms