Protein–RNA interactions for Protein: P24863

CCNC, Cyclin-C, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNCP24863 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCNCP24863 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.93■□□□□ 0.3
CCNCP24863 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.93■□□□□ 0.3
CCNCP24863 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.93■□□□□ 0.3
CCNCP24863 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.93■□□□□ 0.3
CCNCP24863 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCNCP24863 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCNCP24863 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCNCP24863 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCNCP24863 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.93■□□□□ 0.3
CCNCP24863 AC005052.1-201ENST00000625181 2492 ntBASIC16.93■□□□□ 0.3
CCNCP24863 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCNCP24863 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CCNCP24863 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCNCP24863 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNCP24863 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.92■□□□□ 0.3
CCNCP24863 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNCP24863 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CCNCP24863 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CCNCP24863 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCNCP24863 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNCP24863 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCNCP24863 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCNCP24863 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCNCP24863 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNCP24863 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.92■□□□□ 0.3
CCNCP24863 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.92■□□□□ 0.3
CCNCP24863 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCNCP24863 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.92■□□□□ 0.3
CCNCP24863 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.92■□□□□ 0.3
CCNCP24863 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.92■□□□□ 0.3
CCNCP24863 AC040169.1-201ENST00000565382 521 ntBASIC16.92■□□□□ 0.3
CCNCP24863 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.92■□□□□ 0.3
CCNCP24863 AP002472.1-201ENST00000577490 586 ntBASIC16.92■□□□□ 0.3
CCNCP24863 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCNCP24863 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCNCP24863 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCNCP24863 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
CCNCP24863 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.92■□□□□ 0.3
CCNCP24863 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CCNCP24863 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.92■□□□□ 0.3
CCNCP24863 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCNCP24863 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.92■□□□□ 0.3
CCNCP24863 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCNCP24863 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCNCP24863 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCNCP24863 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNCP24863 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.91■□□□□ 0.3
CCNCP24863 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCNCP24863 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCNCP24863 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCNCP24863 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNCP24863 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCNCP24863 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNCP24863 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.91■□□□□ 0.3
CCNCP24863 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNCP24863 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCNCP24863 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCNCP24863 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNCP24863 MIR940-201ENST00000401276 94 ntBASIC16.91■□□□□ 0.3
CCNCP24863 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.91■□□□□ 0.3
CCNCP24863 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.91■□□□□ 0.3
CCNCP24863 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCNCP24863 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.91■□□□□ 0.3
CCNCP24863 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.91■□□□□ 0.3
CCNCP24863 AL161645.1-201ENST00000622716 1255 ntBASIC16.91■□□□□ 0.3
CCNCP24863 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNCP24863 AC092919.2-201ENST00000623631 1645 ntBASIC16.91■□□□□ 0.3
CCNCP24863 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNCP24863 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.91■□□□□ 0.3
CCNCP24863 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNCP24863 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNCP24863 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
CCNCP24863 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CCNCP24863 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCNCP24863 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCNCP24863 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.91■□□□□ 0.3
CCNCP24863 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCNCP24863 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNCP24863 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCNCP24863 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CCNCP24863 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNCP24863 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNCP24863 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.9■□□□□ 0.3
CCNCP24863 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNCP24863 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNCP24863 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCNCP24863 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCNCP24863 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNCP24863 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNCP24863 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNCP24863 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNCP24863 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.9■□□□□ 0.3
CCNCP24863 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCNCP24863 AC002056.1-201ENST00000395613 760 ntBASIC16.9■□□□□ 0.3
CCNCP24863 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCNCP24863 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.9■□□□□ 0.3
CCNCP24863 PGAM5P1-201ENST00000518923 814 ntBASIC16.9■□□□□ 0.3
CCNCP24863 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNCP24863 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms