Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB4AP20338 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB4AP20338 AC073347.1-201ENST00000421633 2643 ntBASIC12.82□□□□□ -0.36
RAB4AP20338 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RAB4AP20338 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB4AP20338 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB4AP20338 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB4AP20338 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
RAB4AP20338 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB4AP20338 LINC00167-201ENST00000530583 1419 ntBASIC12.82□□□□□ -0.36
RAB4AP20338 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB4AP20338 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
RAB4AP20338 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB4AP20338 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB4AP20338 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB4AP20338 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB4AP20338 AL139385.1-201ENST00000611744 3272 ntBASIC12.82□□□□□ -0.36
RAB4AP20338 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB4AP20338 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB4AP20338 GLI3-203ENST00000437480 451 ntTSL 2 BASIC12.82□□□□□ -0.36
RAB4AP20338 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC12.82□□□□□ -0.36
RAB4AP20338 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RAB4AP20338 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC12.82□□□□□ -0.36
RAB4AP20338 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
RAB4AP20338 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC12.82□□□□□ -0.36
RAB4AP20338 AC142086.2-201ENST00000569753 217 ntBASIC12.82□□□□□ -0.36
RAB4AP20338 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC12.82□□□□□ -0.36
RAB4AP20338 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
RAB4AP20338 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB4AP20338 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB4AP20338 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB4AP20338 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB4AP20338 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB4AP20338 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.82□□□□□ -0.36
RAB4AP20338 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB4AP20338 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB4AP20338 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.82□□□□□ -0.36
RAB4AP20338 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB4AP20338 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RAB4AP20338 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB4AP20338 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB4AP20338 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.82□□□□□ -0.36
RAB4AP20338 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
RAB4AP20338 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
RAB4AP20338 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
RAB4AP20338 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB4AP20338 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RAB4AP20338 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC12.81□□□□□ -0.36
RAB4AP20338 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
RAB4AP20338 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
RAB4AP20338 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB4AP20338 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
RAB4AP20338 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
RAB4AP20338 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RAB4AP20338 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB4AP20338 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB4AP20338 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC12.81□□□□□ -0.36
RAB4AP20338 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
RAB4AP20338 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC12.81□□□□□ -0.36
RAB4AP20338 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RAB4AP20338 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 PARL-206ENST00000435888 1098 ntTSL 5 BASIC12.81□□□□□ -0.36
RAB4AP20338 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC12.81□□□□□ -0.36
RAB4AP20338 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
RAB4AP20338 RN7SL471P-201ENST00000580476 299 ntBASIC12.81□□□□□ -0.36
RAB4AP20338 AF186192.3-201ENST00000583427 947 ntBASIC12.81□□□□□ -0.36
RAB4AP20338 AC008687.5-201ENST00000593746 558 ntBASIC12.81□□□□□ -0.36
RAB4AP20338 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC12.81□□□□□ -0.36
RAB4AP20338 GXYLT1P5-201ENST00000614548 1189 ntBASIC12.81□□□□□ -0.36
RAB4AP20338 AC112497.1-201ENST00000624824 639 ntBASIC12.81□□□□□ -0.36
RAB4AP20338 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
RAB4AP20338 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
RAB4AP20338 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RAB4AP20338 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms