Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.11■□□□□ 0.33
ERCC2P18074 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC2P18074 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC2P18074 AC109635.5-201ENST00000533593 962 ntBASIC17.11■□□□□ 0.33
ERCC2P18074 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.11■□□□□ 0.33
ERCC2P18074 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
ERCC2P18074 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC2P18074 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC2P18074 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC2P18074 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC2P18074 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC2P18074 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC2P18074 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC2P18074 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ERCC2P18074 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC2P18074 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC2P18074 AC092364.2-201ENST00000596710 2692 ntBASIC17.11■□□□□ 0.33
ERCC2P18074 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ERCC2P18074 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ERCC2P18074 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ERCC2P18074 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
ERCC2P18074 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.11■□□□□ 0.33
ERCC2P18074 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC2P18074 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.1■□□□□ 0.33
ERCC2P18074 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ERCC2P18074 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC2P18074 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
ERCC2P18074 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ERCC2P18074 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC2P18074 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC2P18074 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC2P18074 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC2P18074 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.1■□□□□ 0.33
ERCC2P18074 AC092474.2-201ENST00000424288 719 ntBASIC17.1■□□□□ 0.33
ERCC2P18074 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ERCC2P18074 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.1■□□□□ 0.33
ERCC2P18074 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.1■□□□□ 0.33
ERCC2P18074 AC068137.2-201ENST00000605408 478 ntBASIC17.1■□□□□ 0.33
ERCC2P18074 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.1■□□□□ 0.33
ERCC2P18074 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.1■□□□□ 0.33
ERCC2P18074 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.1■□□□□ 0.33
ERCC2P18074 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.1■□□□□ 0.33
ERCC2P18074 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.1■□□□□ 0.33
ERCC2P18074 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC2P18074 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.1■□□□□ 0.33
ERCC2P18074 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ERCC2P18074 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC2P18074 PCDH8P1-201ENST00000428983 2773 ntBASIC17.1■□□□□ 0.33
ERCC2P18074 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC2P18074 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.1■□□□□ 0.33
ERCC2P18074 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ERCC2P18074 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
ERCC2P18074 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.09■□□□□ 0.33
ERCC2P18074 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC2P18074 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC2P18074 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC2P18074 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC2P18074 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC2P18074 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC2P18074 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ERCC2P18074 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC2P18074 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC2P18074 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.09■□□□□ 0.33
ERCC2P18074 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.09■□□□□ 0.33
ERCC2P18074 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC2P18074 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.09■□□□□ 0.33
ERCC2P18074 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC2P18074 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.09■□□□□ 0.33
ERCC2P18074 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.09■□□□□ 0.33
ERCC2P18074 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.09■□□□□ 0.33
ERCC2P18074 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.09■□□□□ 0.33
ERCC2P18074 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.09■□□□□ 0.33
ERCC2P18074 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.09■□□□□ 0.33
ERCC2P18074 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.09■□□□□ 0.33
ERCC2P18074 AC040169.1-201ENST00000565382 521 ntBASIC17.09■□□□□ 0.33
ERCC2P18074 AP002472.1-201ENST00000577490 586 ntBASIC17.09■□□□□ 0.33
ERCC2P18074 AC020765.3-201ENST00000613051 740 ntBASIC17.09■□□□□ 0.33
ERCC2P18074 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.09■□□□□ 0.33
ERCC2P18074 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC2P18074 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.09■□□□□ 0.33
ERCC2P18074 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ERCC2P18074 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ERCC2P18074 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC2P18074 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.09■□□□□ 0.33
ERCC2P18074 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ERCC2P18074 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC2P18074 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC2P18074 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.09■□□□□ 0.33
ERCC2P18074 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
ERCC2P18074 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC2P18074 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC2P18074 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC2P18074 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC2P18074 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ERCC2P18074 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ERCC2P18074 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
ERCC2P18074 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ERCC2P18074 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ERCC2P18074 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ERCC2P18074 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms