Protein–RNA interactions for Protein: P0DP09

IGKV1-13, Immunoglobulin kappa variable 1-13, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1-13P0DP09 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
IGKV1-13P0DP09 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
IGKV1-13P0DP09 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.77□□□□□ -0.2
IGKV1-13P0DP09 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
IGKV1-13P0DP09 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
IGKV1-13P0DP09 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
IGKV1-13P0DP09 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
IGKV1-13P0DP09 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 REXO1L8P-201ENST00000604378 1897 ntBASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 AL732292.2-201ENST00000609649 430 ntBASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 AL589182.2-201ENST00000619332 1049 ntBASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 AL139288.1-201ENST00000623748 933 ntBASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 AC103702.1-201ENST00000548801 2630 ntBASIC13.77□□□□□ -0.21
IGKV1-13P0DP09 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 TSPY26P-202ENST00000565928 3884 ntBASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 AL356309.3-201ENST00000624132 1934 ntBASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 AC131009.4-201ENST00000624048 1740 ntBASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
IGKV1-13P0DP09 SLC22A20-204ENST00000530038 1673 ntBASIC13.75□□□□□ -0.21
IGKV1-13P0DP09 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
IGKV1-13P0DP09 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms