Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.25■□□□□ 0.35
CD48P09326 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CD48P09326 AC104109.2-201ENST00000602919 1418 ntBASIC17.25■□□□□ 0.35
CD48P09326 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD48P09326 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.25■□□□□ 0.35
CD48P09326 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.25■□□□□ 0.35
CD48P09326 CRYGEP-201ENST00000412192 528 ntBASIC17.25■□□□□ 0.35
CD48P09326 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.25■□□□□ 0.35
CD48P09326 AL513480.1-201ENST00000451731 511 ntBASIC17.25■□□□□ 0.35
CD48P09326 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
CD48P09326 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.25■□□□□ 0.35
CD48P09326 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CD48P09326 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.25■□□□□ 0.35
CD48P09326 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.25■□□□□ 0.35
CD48P09326 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CD48P09326 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD48P09326 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CD48P09326 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD48P09326 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.25■□□□□ 0.35
CD48P09326 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CD48P09326 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD48P09326 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.25■□□□□ 0.35
CD48P09326 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CD48P09326 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.25■□□□□ 0.35
CD48P09326 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CD48P09326 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD48P09326 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CD48P09326 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD48P09326 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CD48P09326 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.25■□□□□ 0.35
CD48P09326 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CD48P09326 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CD48P09326 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.24■□□□□ 0.35
CD48P09326 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CD48P09326 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD48P09326 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.24■□□□□ 0.35
CD48P09326 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CD48P09326 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD48P09326 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD48P09326 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.24■□□□□ 0.35
CD48P09326 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CD48P09326 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.24■□□□□ 0.35
CD48P09326 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CD48P09326 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.24■□□□□ 0.35
CD48P09326 AC034105.1-201ENST00000563488 319 ntBASIC17.24■□□□□ 0.35
CD48P09326 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.24■□□□□ 0.35
CD48P09326 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.24■□□□□ 0.35
CD48P09326 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.24■□□□□ 0.35
CD48P09326 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.24■□□□□ 0.35
CD48P09326 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.24■□□□□ 0.35
CD48P09326 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD48P09326 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD48P09326 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD48P09326 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.24■□□□□ 0.35
CD48P09326 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CD48P09326 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CD48P09326 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CD48P09326 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CD48P09326 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD48P09326 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CD48P09326 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD48P09326 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CD48P09326 OR6D1P-203ENST00000641209 4860 ntBASIC17.24■□□□□ 0.35
CD48P09326 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CD48P09326 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD48P09326 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
CD48P09326 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.23■□□□□ 0.35
CD48P09326 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.23■□□□□ 0.35
CD48P09326 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
CD48P09326 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD48P09326 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD48P09326 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD48P09326 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD48P09326 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD48P09326 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.23■□□□□ 0.35
CD48P09326 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CD48P09326 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
CD48P09326 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CD48P09326 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD48P09326 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.23■□□□□ 0.35
CD48P09326 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CD48P09326 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
CD48P09326 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CD48P09326 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.23■□□□□ 0.35
CD48P09326 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.23■□□□□ 0.35
CD48P09326 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD48P09326 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CD48P09326 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.23■□□□□ 0.35
CD48P09326 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.23■□□□□ 0.35
CD48P09326 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD48P09326 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.23■□□□□ 0.35
CD48P09326 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.23■□□□□ 0.35
CD48P09326 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CD48P09326 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CD48P09326 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD48P09326 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
CD48P09326 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.23■□□□□ 0.35
CD48P09326 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD48P09326 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CD48P09326 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms