Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.87■□□□□ 0.77
POLR3DP05423 AC025678.2-201ENST00000562061 970 ntBASIC19.87■□□□□ 0.77
POLR3DP05423 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.87■□□□□ 0.77
POLR3DP05423 AC009093.7-201ENST00000623853 1223 ntBASIC19.87■□□□□ 0.77
POLR3DP05423 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.87■□□□□ 0.77
POLR3DP05423 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR3DP05423 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR3DP05423 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
POLR3DP05423 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR3DP05423 AC016027.1-202ENST00000607927 1699 ntBASIC19.87■□□□□ 0.77
POLR3DP05423 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR3DP05423 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR3DP05423 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.87■□□□□ 0.77
POLR3DP05423 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR3DP05423 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.87■□□□□ 0.77
POLR3DP05423 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.87■□□□□ 0.77
POLR3DP05423 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR3DP05423 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
POLR3DP05423 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
POLR3DP05423 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR3DP05423 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
POLR3DP05423 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR3DP05423 FLJ38576-201ENST00000623820 2459 ntBASIC19.86■□□□□ 0.77
POLR3DP05423 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.86■□□□□ 0.77
POLR3DP05423 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
POLR3DP05423 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
POLR3DP05423 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
POLR3DP05423 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR3DP05423 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
POLR3DP05423 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
POLR3DP05423 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR3DP05423 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.86■□□□□ 0.77
POLR3DP05423 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.86■□□□□ 0.77
POLR3DP05423 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR3DP05423 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
POLR3DP05423 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
POLR3DP05423 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
POLR3DP05423 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
POLR3DP05423 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.86■□□□□ 0.77
POLR3DP05423 FAM58DP-201ENST00000428076 619 ntBASIC19.86■□□□□ 0.77
POLR3DP05423 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
POLR3DP05423 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.86■□□□□ 0.77
POLR3DP05423 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.86■□□□□ 0.77
POLR3DP05423 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
POLR3DP05423 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.86■□□□□ 0.77
POLR3DP05423 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.86■□□□□ 0.77
POLR3DP05423 AC006277.1-201ENST00000624348 1610 ntBASIC19.86■□□□□ 0.77
POLR3DP05423 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
POLR3DP05423 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR3DP05423 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.86■□□□□ 0.77
POLR3DP05423 PCDHB17P-201ENST00000539533 2393 ntBASIC19.86■□□□□ 0.77
POLR3DP05423 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR3DP05423 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR3DP05423 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR3DP05423 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.86■□□□□ 0.77
POLR3DP05423 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR3DP05423 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR3DP05423 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
POLR3DP05423 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.86■□□□□ 0.77
POLR3DP05423 AC079328.2-201ENST00000561241 3354 ntBASIC19.86■□□□□ 0.77
POLR3DP05423 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR3DP05423 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR3DP05423 RNF216P1-203ENST00000404404 2427 ntBASIC19.85■□□□□ 0.77
POLR3DP05423 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
POLR3DP05423 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
POLR3DP05423 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
POLR3DP05423 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.85■□□□□ 0.77
POLR3DP05423 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR3DP05423 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.85■□□□□ 0.77
POLR3DP05423 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.85■□□□□ 0.77
POLR3DP05423 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR3DP05423 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR3DP05423 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
POLR3DP05423 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.85■□□□□ 0.77
POLR3DP05423 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.85■□□□□ 0.77
POLR3DP05423 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
POLR3DP05423 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR3DP05423 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR3DP05423 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
POLR3DP05423 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
POLR3DP05423 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.85■□□□□ 0.77
POLR3DP05423 AC021097.1-201ENST00000607902 574 ntBASIC19.85■□□□□ 0.77
POLR3DP05423 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.85■□□□□ 0.77
POLR3DP05423 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR3DP05423 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR3DP05423 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.85■□□□□ 0.77
POLR3DP05423 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
POLR3DP05423 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
POLR3DP05423 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
POLR3DP05423 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR3DP05423 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR3DP05423 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR3DP05423 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR3DP05423 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
POLR3DP05423 UBALD1-205ENST00000590891 2641 ntBASIC19.85■□□□□ 0.77
POLR3DP05423 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
POLR3DP05423 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
POLR3DP05423 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
POLR3DP05423 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.85■□□□□ 0.77
POLR3DP05423 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms