Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGN1P05114 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMGN1P05114 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.14■□□□□ 0.01
HMGN1P05114 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.14■□□□□ 0.01
HMGN1P05114 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGN1P05114 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HMGN1P05114 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMGN1P05114 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGN1P05114 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGN1P05114 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.14■□□□□ 0.01
HMGN1P05114 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGN1P05114 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HMGN1P05114 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HMGN1P05114 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.13■□□□□ 0.01
HMGN1P05114 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.13■□□□□ 0.01
HMGN1P05114 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.13■□□□□ 0.01
HMGN1P05114 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
HMGN1P05114 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HMGN1P05114 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.13■□□□□ 0.01
HMGN1P05114 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HMGN1P05114 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HMGN1P05114 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HMGN1P05114 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.13■□□□□ 0.01
HMGN1P05114 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.13■□□□□ 0.01
HMGN1P05114 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.13■□□□□ 0.01
HMGN1P05114 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.13■□□□□ 0.01
HMGN1P05114 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.13■□□□□ 0.01
HMGN1P05114 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.13■□□□□ 0.01
HMGN1P05114 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.13■□□□□ 0.01
HMGN1P05114 AC074051.2-201ENST00000565115 352 ntBASIC15.13■□□□□ 0.01
HMGN1P05114 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.13■□□□□ 0.01
HMGN1P05114 AP002414.4-201ENST00000589764 1148 ntBASIC15.13■□□□□ 0.01
HMGN1P05114 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 GGT4P-201ENST00000623672 1708 ntBASIC15.13■□□□□ 0.01
HMGN1P05114 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.13■□□□□ 0.01
HMGN1P05114 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.13■□□□□ 0.01
HMGN1P05114 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HMGN1P05114 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.13■□□□□ 0.01
HMGN1P05114 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HMGN1P05114 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HMGN1P05114 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGN1P05114 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
HMGN1P05114 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGN1P05114 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
HMGN1P05114 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMGN1P05114 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
HMGN1P05114 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGN1P05114 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.12■□□□□ 0.01
HMGN1P05114 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGN1P05114 KRT8P39-201ENST00000396270 1433 ntBASIC15.12■□□□□ 0.01
HMGN1P05114 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGN1P05114 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.12■□□□□ 0.01
HMGN1P05114 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGN1P05114 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGN1P05114 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGN1P05114 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGN1P05114 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMGN1P05114 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMGN1P05114 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HMGN1P05114 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGN1P05114 TMPOP1-202ENST00000424642 1267 ntBASIC15.12■□□□□ 0.01
HMGN1P05114 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.12■□□□□ 0.01
HMGN1P05114 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGN1P05114 AP002383.4-201ENST00000442518 975 ntBASIC15.12■□□□□ 0.01
HMGN1P05114 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.12■□□□□ 0.01
HMGN1P05114 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGN1P05114 AC104819.1-201ENST00000504587 486 ntBASIC15.12■□□□□ 0.01
HMGN1P05114 FAM86EP-206ENST00000510506 987 ntBASIC15.12■□□□□ 0.01
HMGN1P05114 MIR5100-201ENST00000579544 119 ntBASIC15.12■□□□□ 0.01
HMGN1P05114 AC116407.4-201ENST00000623319 1061 ntBASIC15.12■□□□□ 0.01
HMGN1P05114 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.12■□□□□ 0.01
HMGN1P05114 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGN1P05114 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms