Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 AL359075.1-203ENST00000462729 1002 ntBASIC14.4□□□□□ -0.1
HLA-DQB1P01920 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.4□□□□□ -0.1
HLA-DQB1P01920 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 AC106881.1-201ENST00000605849 3329 ntBASIC14.4□□□□□ -0.1
HLA-DQB1P01920 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DQB1P01920 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
HLA-DQB1P01920 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
HLA-DQB1P01920 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 FER1L4-210ENST00000615531 5998 ntBASIC14.39□□□□□ -0.11
HLA-DQB1P01920 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 AC113347.1-201ENST00000413321 391 ntBASIC14.39□□□□□ -0.11
HLA-DQB1P01920 AC026396.1-201ENST00000419388 421 ntBASIC14.39□□□□□ -0.11
HLA-DQB1P01920 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HLA-DQB1P01920 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms