Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MT-CO1P00395 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MT-CO1P00395 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MT-CO1P00395 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.06■□□□□ 0.32
MT-CO1P00395 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
MT-CO1P00395 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MT-CO1P00395 AC005915.1-201ENST00000624912 2018 ntBASIC17.06■□□□□ 0.32
MT-CO1P00395 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MT-CO1P00395 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
MT-CO1P00395 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
MT-CO1P00395 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.06■□□□□ 0.32
MT-CO1P00395 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MT-CO1P00395 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-CO1P00395 AC018695.7-201ENST00000624587 2492 ntBASIC17.06■□□□□ 0.32
MT-CO1P00395 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-CO1P00395 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-CO1P00395 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
MT-CO1P00395 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-CO1P00395 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.06■□□□□ 0.32
MT-CO1P00395 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.06■□□□□ 0.32
MT-CO1P00395 AC092183.1-201ENST00000469884 875 ntBASIC17.06■□□□□ 0.32
MT-CO1P00395 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MT-CO1P00395 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.06■□□□□ 0.32
MT-CO1P00395 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.06■□□□□ 0.32
MT-CO1P00395 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-CO1P00395 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
MT-CO1P00395 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.06■□□□□ 0.32
MT-CO1P00395 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-CO1P00395 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MT-CO1P00395 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.06■□□□□ 0.32
MT-CO1P00395 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-CO1P00395 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
MT-CO1P00395 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.06■□□□□ 0.32
MT-CO1P00395 AC006277.1-201ENST00000624348 1610 ntBASIC17.06■□□□□ 0.32
MT-CO1P00395 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-CO1P00395 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MT-CO1P00395 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-CO1P00395 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-CO1P00395 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MT-CO1P00395 AL118508.1-201ENST00000613502 2345 ntBASIC17.05■□□□□ 0.32
MT-CO1P00395 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.05■□□□□ 0.32
MT-CO1P00395 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MT-CO1P00395 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
MT-CO1P00395 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-CO1P00395 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
MT-CO1P00395 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.05■□□□□ 0.32
MT-CO1P00395 AGGF1P2-201ENST00000426656 2106 ntBASIC17.05■□□□□ 0.32
MT-CO1P00395 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
MT-CO1P00395 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.05■□□□□ 0.32
MT-CO1P00395 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.05■□□□□ 0.32
MT-CO1P00395 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-CO1P00395 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-CO1P00395 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-CO1P00395 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-CO1P00395 ADH5P3-201ENST00000433842 1137 ntBASIC17.05■□□□□ 0.32
MT-CO1P00395 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.05■□□□□ 0.32
MT-CO1P00395 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
MT-CO1P00395 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.05■□□□□ 0.32
MT-CO1P00395 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.05■□□□□ 0.32
MT-CO1P00395 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.05■□□□□ 0.32
MT-CO1P00395 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.05■□□□□ 0.32
MT-CO1P00395 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
MT-CO1P00395 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.05■□□□□ 0.32
MT-CO1P00395 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.05■□□□□ 0.32
MT-CO1P00395 AP001350.2-201ENST00000625104 1094 ntBASIC17.05■□□□□ 0.32
MT-CO1P00395 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
MT-CO1P00395 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-CO1P00395 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-CO1P00395 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
MT-CO1P00395 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-CO1P00395 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-CO1P00395 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MT-CO1P00395 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
MT-CO1P00395 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MT-CO1P00395 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MT-CO1P00395 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MT-CO1P00395 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.05■□□□□ 0.32
MT-CO1P00395 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
MT-CO1P00395 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
MT-CO1P00395 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-CO1P00395 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
MT-CO1P00395 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
MT-CO1P00395 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-CO1P00395 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-CO1P00395 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
MT-CO1P00395 PCDHA14-201ENST00000506751 2298 ntBASIC17.04■□□□□ 0.32
MT-CO1P00395 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-CO1P00395 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.04■□□□□ 0.32
MT-CO1P00395 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MT-CO1P00395 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MT-CO1P00395 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-CO1P00395 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.04■□□□□ 0.32
MT-CO1P00395 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MT-CO1P00395 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.04■□□□□ 0.32
MT-CO1P00395 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-CO1P00395 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-CO1P00395 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MT-CO1P00395 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MT-CO1P00395 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MT-CO1P00395 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms