Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LGI1O95970 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LGI1O95970 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LGI1O95970 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LGI1O95970 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LGI1O95970 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LGI1O95970 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LGI1O95970 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LGI1O95970 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.41■□□□□ 0.06
LGI1O95970 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
LGI1O95970 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.41■□□□□ 0.06
LGI1O95970 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
LGI1O95970 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LGI1O95970 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LGI1O95970 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LGI1O95970 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LGI1O95970 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.41■□□□□ 0.06
LGI1O95970 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LGI1O95970 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LGI1O95970 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.4■□□□□ 0.06
LGI1O95970 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LGI1O95970 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LGI1O95970 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.4■□□□□ 0.06
LGI1O95970 AL353732.1-201ENST00000569618 1459 ntBASIC15.4■□□□□ 0.06
LGI1O95970 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LGI1O95970 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
LGI1O95970 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LGI1O95970 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.4■□□□□ 0.06
LGI1O95970 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
LGI1O95970 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.4■□□□□ 0.06
LGI1O95970 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.4■□□□□ 0.06
LGI1O95970 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LGI1O95970 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
LGI1O95970 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LGI1O95970 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.4■□□□□ 0.06
LGI1O95970 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.4■□□□□ 0.06
LGI1O95970 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.4■□□□□ 0.06
LGI1O95970 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.4■□□□□ 0.06
LGI1O95970 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.4■□□□□ 0.06
LGI1O95970 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LGI1O95970 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.4■□□□□ 0.06
LGI1O95970 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.4■□□□□ 0.06
LGI1O95970 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.4■□□□□ 0.06
LGI1O95970 AC107918.2-201ENST00000530817 355 ntBASIC15.4■□□□□ 0.06
LGI1O95970 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.4■□□□□ 0.06
LGI1O95970 CYP2A7P1-201ENST00000595391 815 ntBASIC15.4■□□□□ 0.06
LGI1O95970 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.4■□□□□ 0.06
LGI1O95970 AC107918.4-202ENST00000641623 219 ntBASIC15.4■□□□□ 0.06
LGI1O95970 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LGI1O95970 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
LGI1O95970 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.4■□□□□ 0.06
LGI1O95970 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LGI1O95970 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
LGI1O95970 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LGI1O95970 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.4■□□□□ 0.06
LGI1O95970 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LGI1O95970 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.4■□□□□ 0.06
LGI1O95970 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LGI1O95970 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LGI1O95970 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LGI1O95970 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
LGI1O95970 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.4■□□□□ 0.06
LGI1O95970 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LGI1O95970 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LGI1O95970 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.4■□□□□ 0.06
LGI1O95970 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LGI1O95970 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LGI1O95970 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.39■□□□□ 0.05
LGI1O95970 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.39■□□□□ 0.05
LGI1O95970 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LGI1O95970 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
LGI1O95970 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
LGI1O95970 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LGI1O95970 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.39■□□□□ 0.05
LGI1O95970 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LGI1O95970 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.39■□□□□ 0.05
LGI1O95970 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LGI1O95970 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
LGI1O95970 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
LGI1O95970 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LGI1O95970 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
LGI1O95970 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LGI1O95970 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.39■□□□□ 0.05
LGI1O95970 TPM4P1-201ENST00000436100 807 ntBASIC15.39■□□□□ 0.05
LGI1O95970 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.39■□□□□ 0.05
LGI1O95970 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.39■□□□□ 0.05
LGI1O95970 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.39■□□□□ 0.05
LGI1O95970 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.39■□□□□ 0.05
LGI1O95970 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.39■□□□□ 0.05
LGI1O95970 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.39■□□□□ 0.05
LGI1O95970 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
LGI1O95970 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.39■□□□□ 0.05
LGI1O95970 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.39■□□□□ 0.05
LGI1O95970 GGTLC5P-201ENST00000617623 998 ntBASIC15.39■□□□□ 0.05
LGI1O95970 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.39■□□□□ 0.05
LGI1O95970 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
LGI1O95970 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LGI1O95970 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LGI1O95970 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LGI1O95970 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms