Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.82□□□□□ -0.04
CNOT4O95628 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.82□□□□□ -0.04
CNOT4O95628 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
CNOT4O95628 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CNOT4O95628 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CNOT4O95628 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
CNOT4O95628 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CNOT4O95628 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT4O95628 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT4O95628 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
CNOT4O95628 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CNOT4O95628 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT4O95628 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT4O95628 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.81□□□□□ -0.04
CNOT4O95628 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CNOT4O95628 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT4O95628 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT4O95628 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT4O95628 LINC00895-201ENST00000629028 1637 ntBASIC14.81□□□□□ -0.04
CNOT4O95628 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CNOT4O95628 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT4O95628 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT4O95628 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CNOT4O95628 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
CNOT4O95628 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CNOT4O95628 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CNOT4O95628 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT4O95628 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT4O95628 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT4O95628 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT4O95628 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT4O95628 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT4O95628 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT4O95628 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.81□□□□□ -0.04
CNOT4O95628 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.81□□□□□ -0.04
CNOT4O95628 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.81□□□□□ -0.04
CNOT4O95628 AL645939.2-201ENST00000427340 991 ntBASIC14.81□□□□□ -0.04
CNOT4O95628 CNN2P11-201ENST00000429351 262 ntBASIC14.81□□□□□ -0.04
CNOT4O95628 FAM86C2P-203ENST00000528684 1004 ntBASIC14.81□□□□□ -0.04
CNOT4O95628 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CNOT4O95628 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.81□□□□□ -0.04
CNOT4O95628 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.81□□□□□ -0.04
CNOT4O95628 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.81□□□□□ -0.04
CNOT4O95628 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.81□□□□□ -0.04
CNOT4O95628 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT4O95628 ELL2P1-201ENST00000413990 1906 ntBASIC14.81□□□□□ -0.04
CNOT4O95628 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.81□□□□□ -0.04
CNOT4O95628 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CNOT4O95628 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT4O95628 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT4O95628 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CNOT4O95628 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.81□□□□□ -0.04
CNOT4O95628 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT4O95628 SLC22A20-204ENST00000530038 1673 ntBASIC14.81□□□□□ -0.04
CNOT4O95628 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.8□□□□□ -0.04
CNOT4O95628 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNOT4O95628 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CNOT4O95628 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNOT4O95628 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CNOT4O95628 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNOT4O95628 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CNOT4O95628 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.8□□□□□ -0.04
CNOT4O95628 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.8□□□□□ -0.04
CNOT4O95628 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNOT4O95628 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.8□□□□□ -0.04
CNOT4O95628 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
CNOT4O95628 AC092364.2-202ENST00000597012 1073 ntBASIC14.8□□□□□ -0.04
CNOT4O95628 AC091812.2-201ENST00000619081 385 ntBASIC14.8□□□□□ -0.04
CNOT4O95628 AL139011.1-202ENST00000642063 584 ntBASIC14.8□□□□□ -0.04
CNOT4O95628 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNOT4O95628 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNOT4O95628 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNOT4O95628 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.8□□□□□ -0.04
CNOT4O95628 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CNOT4O95628 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNOT4O95628 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.8□□□□□ -0.04
CNOT4O95628 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CNOT4O95628 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
CNOT4O95628 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNOT4O95628 AC126755.1-201ENST00000525846 6405 ntBASIC14.8□□□□□ -0.04
CNOT4O95628 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.8□□□□□ -0.04
CNOT4O95628 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNOT4O95628 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNOT4O95628 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNOT4O95628 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms