Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VAPBO95292 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VAPBO95292 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VAPBO95292 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.76■□□□□ 0.27
VAPBO95292 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VAPBO95292 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
VAPBO95292 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VAPBO95292 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VAPBO95292 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.76■□□□□ 0.27
VAPBO95292 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
VAPBO95292 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VAPBO95292 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
VAPBO95292 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VAPBO95292 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VAPBO95292 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VAPBO95292 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.75■□□□□ 0.27
VAPBO95292 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VAPBO95292 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VAPBO95292 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VAPBO95292 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VAPBO95292 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
VAPBO95292 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VAPBO95292 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.75■□□□□ 0.27
VAPBO95292 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.75■□□□□ 0.27
VAPBO95292 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VAPBO95292 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
VAPBO95292 MRPL20P1-201ENST00000400819 433 ntBASIC16.75■□□□□ 0.27
VAPBO95292 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VAPBO95292 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VAPBO95292 AC092910.1-201ENST00000482027 1129 ntBASIC16.75■□□□□ 0.27
VAPBO95292 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.75■□□□□ 0.27
VAPBO95292 AP002469.2-201ENST00000531724 424 ntBASIC16.75■□□□□ 0.27
VAPBO95292 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.75■□□□□ 0.27
VAPBO95292 AL049840.3-201ENST00000602669 611 ntBASIC16.75■□□□□ 0.27
VAPBO95292 AC104692.2-201ENST00000603054 253 ntBASIC16.75■□□□□ 0.27
VAPBO95292 AL773604.1-201ENST00000617417 272 ntBASIC16.75■□□□□ 0.27
VAPBO95292 AC117500.6-201ENST00000624871 588 ntBASIC16.75■□□□□ 0.27
VAPBO95292 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.75■□□□□ 0.27
VAPBO95292 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.75■□□□□ 0.27
VAPBO95292 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VAPBO95292 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.75■□□□□ 0.27
VAPBO95292 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.75■□□□□ 0.27
VAPBO95292 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VAPBO95292 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.75■□□□□ 0.27
VAPBO95292 GGT4P-201ENST00000623672 1708 ntBASIC16.75■□□□□ 0.27
VAPBO95292 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.75■□□□□ 0.27
VAPBO95292 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VAPBO95292 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.75■□□□□ 0.27
VAPBO95292 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VAPBO95292 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.75■□□□□ 0.27
VAPBO95292 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VAPBO95292 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VAPBO95292 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.75■□□□□ 0.27
VAPBO95292 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
VAPBO95292 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
VAPBO95292 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.75■□□□□ 0.27
VAPBO95292 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.75■□□□□ 0.27
VAPBO95292 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
VAPBO95292 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.75■□□□□ 0.27
VAPBO95292 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
VAPBO95292 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VAPBO95292 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VAPBO95292 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
VAPBO95292 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.74■□□□□ 0.27
VAPBO95292 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VAPBO95292 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
VAPBO95292 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.74■□□□□ 0.27
VAPBO95292 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VAPBO95292 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VAPBO95292 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VAPBO95292 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.74■□□□□ 0.27
VAPBO95292 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VAPBO95292 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VAPBO95292 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VAPBO95292 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VAPBO95292 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.74■□□□□ 0.27
VAPBO95292 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VAPBO95292 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VAPBO95292 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VAPBO95292 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.74■□□□□ 0.27
VAPBO95292 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.74■□□□□ 0.27
VAPBO95292 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.74■□□□□ 0.27
VAPBO95292 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.74■□□□□ 0.27
VAPBO95292 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VAPBO95292 KRT126P-201ENST00000549467 1181 ntBASIC16.74■□□□□ 0.27
VAPBO95292 AL160237.2-201ENST00000556165 472 ntBASIC16.74■□□□□ 0.27
VAPBO95292 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
VAPBO95292 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.74■□□□□ 0.27
VAPBO95292 OR7E47P-204ENST00000575924 449 ntBASIC16.74■□□□□ 0.27
VAPBO95292 AP001350.2-201ENST00000625104 1094 ntBASIC16.74■□□□□ 0.27
VAPBO95292 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.74■□□□□ 0.27
VAPBO95292 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
VAPBO95292 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
VAPBO95292 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
VAPBO95292 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.74■□□□□ 0.27
VAPBO95292 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VAPBO95292 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VAPBO95292 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VAPBO95292 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VAPBO95292 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms