Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 PKD1P1-201ENST00000458669 6805 ntBASIC19.8■□□□□ 0.76
MBD4O95243 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.8■□□□□ 0.76
MBD4O95243 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.8■□□□□ 0.76
MBD4O95243 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.8■□□□□ 0.76
MBD4O95243 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.8■□□□□ 0.76
MBD4O95243 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
MBD4O95243 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
MBD4O95243 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.79■□□□□ 0.76
MBD4O95243 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.79■□□□□ 0.76
MBD4O95243 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MBD4O95243 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.79■□□□□ 0.76
MBD4O95243 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MBD4O95243 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD4O95243 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
MBD4O95243 GGT3P-204ENST00000453783 1664 ntBASIC19.79■□□□□ 0.76
MBD4O95243 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
MBD4O95243 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
MBD4O95243 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
MBD4O95243 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MBD4O95243 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.79■□□□□ 0.76
MBD4O95243 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.79■□□□□ 0.76
MBD4O95243 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD4O95243 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.79■□□□□ 0.76
MBD4O95243 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
MBD4O95243 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MBD4O95243 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.79■□□□□ 0.76
MBD4O95243 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
MBD4O95243 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD4O95243 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD4O95243 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MBD4O95243 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MBD4O95243 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
MBD4O95243 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
MBD4O95243 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.78■□□□□ 0.76
MBD4O95243 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MBD4O95243 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.78■□□□□ 0.76
MBD4O95243 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
MBD4O95243 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MBD4O95243 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MBD4O95243 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MBD4O95243 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MBD4O95243 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
MBD4O95243 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
MBD4O95243 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.78■□□□□ 0.76
MBD4O95243 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.78■□□□□ 0.76
MBD4O95243 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.78■□□□□ 0.76
MBD4O95243 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.78■□□□□ 0.76
MBD4O95243 AC020765.3-201ENST00000613051 740 ntBASIC19.78■□□□□ 0.76
MBD4O95243 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.78■□□□□ 0.76
MBD4O95243 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MBD4O95243 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MBD4O95243 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MBD4O95243 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MBD4O95243 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
MBD4O95243 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
MBD4O95243 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.78■□□□□ 0.76
MBD4O95243 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.77■□□□□ 0.76
MBD4O95243 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MBD4O95243 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.77■□□□□ 0.76
MBD4O95243 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.77■□□□□ 0.76
MBD4O95243 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MBD4O95243 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MBD4O95243 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.77■□□□□ 0.76
MBD4O95243 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.77■□□□□ 0.76
MBD4O95243 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.77■□□□□ 0.76
MBD4O95243 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.77■□□□□ 0.76
MBD4O95243 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
MBD4O95243 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MBD4O95243 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MBD4O95243 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MBD4O95243 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
MBD4O95243 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.77■□□□□ 0.76
MBD4O95243 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.77■□□□□ 0.76
MBD4O95243 SPDYE14P-201ENST00000442619 822 ntBASIC19.77■□□□□ 0.76
MBD4O95243 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
MBD4O95243 AC026150.2-201ENST00000564693 1156 ntBASIC19.77■□□□□ 0.76
MBD4O95243 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
MBD4O95243 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.77■□□□□ 0.76
MBD4O95243 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.77■□□□□ 0.76
MBD4O95243 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MBD4O95243 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
MBD4O95243 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MBD4O95243 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.77■□□□□ 0.76
MBD4O95243 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
MBD4O95243 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
MBD4O95243 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.76■□□□□ 0.75
MBD4O95243 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
MBD4O95243 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD4O95243 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD4O95243 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD4O95243 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD4O95243 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
MBD4O95243 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
MBD4O95243 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD4O95243 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD4O95243 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.76■□□□□ 0.75
MBD4O95243 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.76■□□□□ 0.75
MBD4O95243 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD4O95243 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MBD4O95243 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms