Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH16O75309 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH16O75309 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
CDH16O75309 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH16O75309 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH16O75309 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH16O75309 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH16O75309 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH16O75309 AL031133.1-201ENST00000406807 723 ntBASIC16.87■□□□□ 0.29
CDH16O75309 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH16O75309 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.87■□□□□ 0.29
CDH16O75309 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH16O75309 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.87■□□□□ 0.29
CDH16O75309 AP005901.3-202ENST00000581653 237 ntBASIC16.87■□□□□ 0.29
CDH16O75309 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
CDH16O75309 AP000867.4-201ENST00000641616 219 ntBASIC16.87■□□□□ 0.29
CDH16O75309 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDH16O75309 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CDH16O75309 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH16O75309 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH16O75309 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH16O75309 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.87■□□□□ 0.29
CDH16O75309 TOP3BP1-201ENST00000420768 1380 ntBASIC16.87■□□□□ 0.29
CDH16O75309 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH16O75309 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH16O75309 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH16O75309 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH16O75309 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH16O75309 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH16O75309 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH16O75309 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CDH16O75309 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH16O75309 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH16O75309 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH16O75309 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.86■□□□□ 0.29
CDH16O75309 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH16O75309 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH16O75309 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH16O75309 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH16O75309 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH16O75309 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CDH16O75309 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CDH16O75309 POU5F1P6-201ENST00000466990 990 ntBASIC16.86■□□□□ 0.29
CDH16O75309 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH16O75309 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.86■□□□□ 0.29
CDH16O75309 AL136038.3-201ENST00000561909 1096 ntBASIC16.86■□□□□ 0.29
CDH16O75309 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.86■□□□□ 0.29
CDH16O75309 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.86■□□□□ 0.29
CDH16O75309 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDH16O75309 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.86■□□□□ 0.29
CDH16O75309 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH16O75309 AC091076.1-201ENST00000610741 619 ntBASIC16.86■□□□□ 0.29
CDH16O75309 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH16O75309 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH16O75309 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH16O75309 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH16O75309 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH16O75309 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH16O75309 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH16O75309 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH16O75309 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH16O75309 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH16O75309 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
CDH16O75309 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CDH16O75309 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH16O75309 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH16O75309 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH16O75309 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH16O75309 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH16O75309 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CDH16O75309 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH16O75309 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH16O75309 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH16O75309 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH16O75309 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH16O75309 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH16O75309 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH16O75309 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH16O75309 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH16O75309 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CDH16O75309 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH16O75309 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH16O75309 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH16O75309 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH16O75309 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH16O75309 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
CDH16O75309 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH16O75309 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.85■□□□□ 0.29
CDH16O75309 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH16O75309 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH16O75309 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH16O75309 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH16O75309 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH16O75309 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH16O75309 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH16O75309 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH16O75309 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH16O75309 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH16O75309 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH16O75309 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms