Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 SPDYE10P-202ENST00000612005 668 ntBASIC16.84■□□□□ 0.29
PRAMEF11O60813 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEF11O60813 SPDYE8P-202ENST00000612377 668 ntBASIC16.84■□□□□ 0.29
PRAMEF11O60813 AC105339.1-204ENST00000636249 355 ntBASIC16.84■□□□□ 0.29
PRAMEF11O60813 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
PRAMEF11O60813 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.84■□□□□ 0.29
PRAMEF11O60813 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEF11O60813 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEF11O60813 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
PRAMEF11O60813 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEF11O60813 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.84■□□□□ 0.29
PRAMEF11O60813 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.84■□□□□ 0.29
PRAMEF11O60813 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEF11O60813 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEF11O60813 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEF11O60813 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PRAMEF11O60813 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEF11O60813 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.84■□□□□ 0.29
PRAMEF11O60813 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
PRAMEF11O60813 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEF11O60813 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEF11O60813 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEF11O60813 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEF11O60813 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.84■□□□□ 0.29
PRAMEF11O60813 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
PRAMEF11O60813 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
PRAMEF11O60813 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PRAMEF11O60813 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.83■□□□□ 0.28
PRAMEF11O60813 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEF11O60813 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEF11O60813 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEF11O60813 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.83■□□□□ 0.28
PRAMEF11O60813 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.83■□□□□ 0.28
PRAMEF11O60813 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.83■□□□□ 0.28
PRAMEF11O60813 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.83■□□□□ 0.28
PRAMEF11O60813 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PRAMEF11O60813 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.83■□□□□ 0.28
PRAMEF11O60813 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEF11O60813 TIMM8BP1-201ENST00000452384 211 ntBASIC16.83■□□□□ 0.28
PRAMEF11O60813 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.83■□□□□ 0.28
PRAMEF11O60813 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PRAMEF11O60813 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
PRAMEF11O60813 AC079140.1-201ENST00000508039 487 ntBASIC16.83■□□□□ 0.28
PRAMEF11O60813 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEF11O60813 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.83■□□□□ 0.28
PRAMEF11O60813 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.83■□□□□ 0.28
PRAMEF11O60813 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.83■□□□□ 0.28
PRAMEF11O60813 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.83■□□□□ 0.28
PRAMEF11O60813 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.83■□□□□ 0.28
PRAMEF11O60813 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEF11O60813 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEF11O60813 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEF11O60813 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PRAMEF11O60813 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEF11O60813 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEF11O60813 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEF11O60813 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEF11O60813 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PRAMEF11O60813 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF11O60813 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.82■□□□□ 0.28
PRAMEF11O60813 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF11O60813 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF11O60813 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PRAMEF11O60813 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PRAMEF11O60813 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.82■□□□□ 0.28
PRAMEF11O60813 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.82■□□□□ 0.28
PRAMEF11O60813 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF11O60813 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF11O60813 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF11O60813 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF11O60813 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF11O60813 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.82■□□□□ 0.28
PRAMEF11O60813 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF11O60813 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF11O60813 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.82■□□□□ 0.28
PRAMEF11O60813 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.82■□□□□ 0.28
PRAMEF11O60813 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
PRAMEF11O60813 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF11O60813 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
PRAMEF11O60813 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.82■□□□□ 0.28
PRAMEF11O60813 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF11O60813 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PRAMEF11O60813 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.82■□□□□ 0.28
PRAMEF11O60813 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PRAMEF11O60813 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
PRAMEF11O60813 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.82■□□□□ 0.28
PRAMEF11O60813 AL138918.1-201ENST00000568306 659 ntBASIC16.82■□□□□ 0.28
PRAMEF11O60813 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.82■□□□□ 0.28
PRAMEF11O60813 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.82■□□□□ 0.28
PRAMEF11O60813 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.82■□□□□ 0.28
PRAMEF11O60813 AC022145.2-201ENST00000598203 171 ntBASIC16.82■□□□□ 0.28
PRAMEF11O60813 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.82■□□□□ 0.28
PRAMEF11O60813 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.82■□□□□ 0.28
PRAMEF11O60813 AL513210.1-201ENST00000629608 234 ntBASIC16.82■□□□□ 0.28
PRAMEF11O60813 AC134684.3-201ENST00000641758 218 ntBASIC16.82■□□□□ 0.28
PRAMEF11O60813 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF11O60813 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF11O60813 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRAMEF11O60813 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PRAMEF11O60813 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms