Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.6■□□□□ 0.25
KLHL41O60662 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.6■□□□□ 0.25
KLHL41O60662 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.6■□□□□ 0.25
KLHL41O60662 AC005336.2-201ENST00000593183 939 ntBASIC16.6■□□□□ 0.25
KLHL41O60662 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
KLHL41O60662 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
KLHL41O60662 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.6■□□□□ 0.25
KLHL41O60662 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
KLHL41O60662 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
KLHL41O60662 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KLHL41O60662 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
KLHL41O60662 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KLHL41O60662 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KLHL41O60662 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KLHL41O60662 AC125634.1-201ENST00000438758 1403 ntBASIC16.6■□□□□ 0.25
KLHL41O60662 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
KLHL41O60662 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
KLHL41O60662 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KLHL41O60662 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KLHL41O60662 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.59■□□□□ 0.25
KLHL41O60662 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL41O60662 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL41O60662 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL41O60662 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL41O60662 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL41O60662 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.59■□□□□ 0.25
KLHL41O60662 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL41O60662 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.59■□□□□ 0.25
KLHL41O60662 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL41O60662 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL41O60662 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
KLHL41O60662 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.59■□□□□ 0.25
KLHL41O60662 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL41O60662 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL41O60662 KRT18P13-201ENST00000400056 1290 ntBASIC16.59■□□□□ 0.25
KLHL41O60662 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.59■□□□□ 0.25
KLHL41O60662 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.59■□□□□ 0.25
KLHL41O60662 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.59■□□□□ 0.25
KLHL41O60662 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.59■□□□□ 0.25
KLHL41O60662 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL41O60662 ABCD1P5-201ENST00000445663 754 ntBASIC16.59■□□□□ 0.25
KLHL41O60662 FGFR3P6-201ENST00000457012 610 ntBASIC16.59■□□□□ 0.25
KLHL41O60662 AP002490.2-201ENST00000524791 560 ntBASIC16.59■□□□□ 0.25
KLHL41O60662 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.59■□□□□ 0.25
KLHL41O60662 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL41O60662 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.59■□□□□ 0.25
KLHL41O60662 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.59■□□□□ 0.25
KLHL41O60662 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL41O60662 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.59■□□□□ 0.25
KLHL41O60662 AC005052.1-201ENST00000625181 2492 ntBASIC16.59■□□□□ 0.25
KLHL41O60662 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
KLHL41O60662 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL41O60662 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
KLHL41O60662 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL41O60662 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL41O60662 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.59■□□□□ 0.25
KLHL41O60662 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL41O60662 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KLHL41O60662 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.59■□□□□ 0.25
KLHL41O60662 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
KLHL41O60662 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
KLHL41O60662 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
KLHL41O60662 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
KLHL41O60662 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
KLHL41O60662 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
KLHL41O60662 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
KLHL41O60662 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.58■□□□□ 0.25
KLHL41O60662 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
KLHL41O60662 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KLHL41O60662 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KLHL41O60662 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.58■□□□□ 0.24
KLHL41O60662 MIR574-201ENST00000385209 96 ntBASIC16.58■□□□□ 0.24
KLHL41O60662 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.58■□□□□ 0.24
KLHL41O60662 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.58■□□□□ 0.24
KLHL41O60662 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.58■□□□□ 0.24
KLHL41O60662 RNA5SP419-201ENST00000515908 135 ntBASIC16.58■□□□□ 0.24
KLHL41O60662 AC106730.1-201ENST00000566722 1090 ntBASIC16.58■□□□□ 0.24
KLHL41O60662 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.58■□□□□ 0.24
KLHL41O60662 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.58■□□□□ 0.24
KLHL41O60662 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.58■□□□□ 0.24
KLHL41O60662 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.58■□□□□ 0.24
KLHL41O60662 AL139288.1-201ENST00000623748 933 ntBASIC16.58■□□□□ 0.24
KLHL41O60662 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.58■□□□□ 0.24
KLHL41O60662 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
KLHL41O60662 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
KLHL41O60662 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KLHL41O60662 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KLHL41O60662 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.58■□□□□ 0.24
KLHL41O60662 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KLHL41O60662 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.58■□□□□ 0.24
KLHL41O60662 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.58■□□□□ 0.24
KLHL41O60662 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KLHL41O60662 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KLHL41O60662 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.57■□□□□ 0.24
KLHL41O60662 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.57■□□□□ 0.24
KLHL41O60662 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
KLHL41O60662 AC103702.1-201ENST00000548801 2630 ntBASIC16.57■□□□□ 0.24
KLHL41O60662 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.57■□□□□ 0.24
KLHL41O60662 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KLHL41O60662 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms