Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.13□□□□□ -0.31
CUBNO60494 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
CUBNO60494 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CUBNO60494 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
CUBNO60494 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
CUBNO60494 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.13□□□□□ -0.31
CUBNO60494 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.13□□□□□ -0.31
CUBNO60494 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CUBNO60494 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CUBNO60494 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CUBNO60494 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC13.13□□□□□ -0.31
CUBNO60494 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CUBNO60494 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CUBNO60494 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CUBNO60494 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CUBNO60494 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CUBNO60494 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CUBNO60494 IGHJ2P-201ENST00000454480 60 ntBASIC13.13□□□□□ -0.31
CUBNO60494 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.13□□□□□ -0.31
CUBNO60494 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CUBNO60494 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.13□□□□□ -0.31
CUBNO60494 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.13□□□□□ -0.31
CUBNO60494 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.13□□□□□ -0.31
CUBNO60494 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CUBNO60494 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.13□□□□□ -0.31
CUBNO60494 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.13□□□□□ -0.31
CUBNO60494 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.13□□□□□ -0.31
CUBNO60494 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.13□□□□□ -0.31
CUBNO60494 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.13□□□□□ -0.31
CUBNO60494 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CUBNO60494 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.12□□□□□ -0.31
CUBNO60494 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.12□□□□□ -0.31
CUBNO60494 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CUBNO60494 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CUBNO60494 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CUBNO60494 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CUBNO60494 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.12□□□□□ -0.31
CUBNO60494 FXNP2-201ENST00000411625 547 ntBASIC13.12□□□□□ -0.31
CUBNO60494 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.12□□□□□ -0.31
CUBNO60494 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CUBNO60494 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CUBNO60494 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CUBNO60494 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CUBNO60494 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.12□□□□□ -0.31
CUBNO60494 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CUBNO60494 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CUBNO60494 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.12□□□□□ -0.31
CUBNO60494 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CUBNO60494 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC13.12□□□□□ -0.31
CUBNO60494 AC090164.3-201ENST00000610780 2143 ntBASIC13.12□□□□□ -0.31
CUBNO60494 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.12□□□□□ -0.31
CUBNO60494 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CUBNO60494 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CUBNO60494 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.12□□□□□ -0.31
CUBNO60494 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CUBNO60494 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CUBNO60494 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.12□□□□□ -0.31
CUBNO60494 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.12□□□□□ -0.31
CUBNO60494 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC13.12□□□□□ -0.31
CUBNO60494 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.12□□□□□ -0.31
CUBNO60494 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.12□□□□□ -0.31
CUBNO60494 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CUBNO60494 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CUBNO60494 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CUBNO60494 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CUBNO60494 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.12□□□□□ -0.31
CUBNO60494 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.12□□□□□ -0.31
CUBNO60494 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CUBNO60494 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CUBNO60494 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CUBNO60494 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.12□□□□□ -0.31
CUBNO60494 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CUBNO60494 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CUBNO60494 AC114501.2-201ENST00000439631 535 ntBASIC13.12□□□□□ -0.31
CUBNO60494 RN7SL618P-201ENST00000477850 296 ntBASIC13.12□□□□□ -0.31
CUBNO60494 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CUBNO60494 AC105129.2-201ENST00000559536 390 ntBASIC13.12□□□□□ -0.31
CUBNO60494 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CUBNO60494 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.12□□□□□ -0.31
CUBNO60494 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.12□□□□□ -0.31
CUBNO60494 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.12□□□□□ -0.31
CUBNO60494 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CUBNO60494 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CUBNO60494 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.11□□□□□ -0.31
CUBNO60494 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CUBNO60494 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.11□□□□□ -0.31
CUBNO60494 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CUBNO60494 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CUBNO60494 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CUBNO60494 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
CUBNO60494 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CUBNO60494 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.11□□□□□ -0.31
CUBNO60494 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CUBNO60494 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CUBNO60494 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.11□□□□□ -0.31
CUBNO60494 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CUBNO60494 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CUBNO60494 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.11□□□□□ -0.31
CUBNO60494 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CUBNO60494 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms