Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCA5O60264 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCA5O60264 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SMARCA5O60264 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCA5O60264 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCA5O60264 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMARCA5O60264 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMARCA5O60264 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMARCA5O60264 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMARCA5O60264 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMARCA5O60264 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC20.52■□□□□ 0.87
SMARCA5O60264 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SMARCA5O60264 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC20.51■□□□□ 0.87
SMARCA5O60264 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SMARCA5O60264 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCA5O60264 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCA5O60264 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SMARCA5O60264 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCA5O60264 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
SMARCA5O60264 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCA5O60264 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC20.51■□□□□ 0.87
SMARCA5O60264 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SMARCA5O60264 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCA5O60264 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.51■□□□□ 0.87
SMARCA5O60264 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.51■□□□□ 0.87
SMARCA5O60264 AL591424.1-201ENST00000442569 1213 ntBASIC20.51■□□□□ 0.87
SMARCA5O60264 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC20.51■□□□□ 0.87
SMARCA5O60264 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC20.51■□□□□ 0.87
SMARCA5O60264 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.51■□□□□ 0.87
SMARCA5O60264 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.51■□□□□ 0.87
SMARCA5O60264 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SMARCA5O60264 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCA5O60264 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.51■□□□□ 0.87
SMARCA5O60264 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SMARCA5O60264 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCA5O60264 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCA5O60264 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SMARCA5O60264 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
SMARCA5O60264 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCA5O60264 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCA5O60264 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCA5O60264 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCA5O60264 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SMARCA5O60264 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
SMARCA5O60264 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCA5O60264 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.5■□□□□ 0.87
SMARCA5O60264 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.5■□□□□ 0.87
SMARCA5O60264 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCA5O60264 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCA5O60264 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCA5O60264 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCA5O60264 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SMARCA5O60264 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.5■□□□□ 0.87
SMARCA5O60264 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.5■□□□□ 0.87
SMARCA5O60264 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCA5O60264 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC20.5■□□□□ 0.87
SMARCA5O60264 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.5■□□□□ 0.87
SMARCA5O60264 PDPK2P-202ENST00000562415 1191 ntBASIC20.5■□□□□ 0.87
SMARCA5O60264 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.5■□□□□ 0.87
SMARCA5O60264 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.5■□□□□ 0.87
SMARCA5O60264 AL009183.1-201ENST00000603760 355 ntBASIC20.5■□□□□ 0.87
SMARCA5O60264 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.5■□□□□ 0.87
SMARCA5O60264 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.5■□□□□ 0.87
SMARCA5O60264 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.5■□□□□ 0.87
SMARCA5O60264 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SMARCA5O60264 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCA5O60264 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC20.5■□□□□ 0.87
SMARCA5O60264 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SMARCA5O60264 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCA5O60264 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC20.5■□□□□ 0.87
SMARCA5O60264 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCA5O60264 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCA5O60264 DOC2GP-204ENST00000639052 2548 ntBASIC20.5■□□□□ 0.87
SMARCA5O60264 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC20.5■□□□□ 0.87
SMARCA5O60264 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCA5O60264 PCGF3-213ENST00000620529 1899 ntBASIC20.5■□□□□ 0.87
SMARCA5O60264 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCA5O60264 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
SMARCA5O60264 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SMARCA5O60264 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCA5O60264 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
SMARCA5O60264 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
SMARCA5O60264 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.49■□□□□ 0.87
SMARCA5O60264 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCA5O60264 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC20.49■□□□□ 0.87
SMARCA5O60264 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
SMARCA5O60264 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCA5O60264 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SMARCA5O60264 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCA5O60264 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCA5O60264 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCA5O60264 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.49■□□□□ 0.87
SMARCA5O60264 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.49■□□□□ 0.87
SMARCA5O60264 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.49■□□□□ 0.87
SMARCA5O60264 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.49■□□□□ 0.87
SMARCA5O60264 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SMARCA5O60264 AP002472.1-201ENST00000577490 586 ntBASIC20.49■□□□□ 0.87
SMARCA5O60264 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCA5O60264 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.49■□□□□ 0.87
SMARCA5O60264 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms