Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDE6DO43924 AC013467.2-201ENST00000605472 835 ntBASIC12.95□□□□□ -0.34
PDE6DO43924 FAM197Y4-202ENST00000622692 608 ntBASIC12.95□□□□□ -0.34
PDE6DO43924 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PDE6DO43924 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.95□□□□□ -0.34
PDE6DO43924 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDE6DO43924 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PDE6DO43924 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
PDE6DO43924 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDE6DO43924 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
PDE6DO43924 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.95□□□□□ -0.34
PDE6DO43924 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDE6DO43924 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDE6DO43924 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
PDE6DO43924 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC12.95□□□□□ -0.34
PDE6DO43924 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PDE6DO43924 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.95□□□□□ -0.34
PDE6DO43924 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDE6DO43924 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.95□□□□□ -0.34
PDE6DO43924 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC12.95□□□□□ -0.34
PDE6DO43924 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PDE6DO43924 PRAL-201ENST00000624952 3286 ntBASIC12.94□□□□□ -0.34
PDE6DO43924 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
PDE6DO43924 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDE6DO43924 AC009336.1-201ENST00000608941 1553 ntBASIC12.94□□□□□ -0.34
PDE6DO43924 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
PDE6DO43924 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDE6DO43924 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
PDE6DO43924 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDE6DO43924 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDE6DO43924 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDE6DO43924 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.94□□□□□ -0.34
PDE6DO43924 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
PDE6DO43924 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDE6DO43924 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
PDE6DO43924 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDE6DO43924 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PDE6DO43924 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDE6DO43924 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
PDE6DO43924 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.94□□□□□ -0.34
PDE6DO43924 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDE6DO43924 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
PDE6DO43924 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.94□□□□□ -0.34
PDE6DO43924 UNC93B2-201ENST00000285383 730 ntBASIC12.94□□□□□ -0.34
PDE6DO43924 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDE6DO43924 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PDE6DO43924 AC007967.3-201ENST00000434308 558 ntBASIC12.94□□□□□ -0.34
PDE6DO43924 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
PDE6DO43924 STK19B-204ENST00000512515 211 ntBASIC12.94□□□□□ -0.34
PDE6DO43924 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PDE6DO43924 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC12.94□□□□□ -0.34
PDE6DO43924 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.94□□□□□ -0.34
PDE6DO43924 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
PDE6DO43924 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC12.94□□□□□ -0.34
PDE6DO43924 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC12.94□□□□□ -0.34
PDE6DO43924 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDE6DO43924 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PDE6DO43924 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.94□□□□□ -0.34
PDE6DO43924 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDE6DO43924 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDE6DO43924 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PDE6DO43924 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDE6DO43924 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDE6DO43924 AC006486.2-201ENST00000624246 2199 ntBASIC12.94□□□□□ -0.34
PDE6DO43924 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
PDE6DO43924 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
PDE6DO43924 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.94□□□□□ -0.34
PDE6DO43924 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
PDE6DO43924 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PDE6DO43924 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PDE6DO43924 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PDE6DO43924 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDE6DO43924 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PDE6DO43924 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
PDE6DO43924 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PDE6DO43924 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
PDE6DO43924 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
PDE6DO43924 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PDE6DO43924 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
PDE6DO43924 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PDE6DO43924 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PDE6DO43924 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.93□□□□□ -0.34
PDE6DO43924 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PDE6DO43924 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
PDE6DO43924 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.93□□□□□ -0.34
PDE6DO43924 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
PDE6DO43924 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
PDE6DO43924 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PDE6DO43924 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
PDE6DO43924 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PDE6DO43924 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
PDE6DO43924 AC006277.1-201ENST00000624348 1610 ntBASIC12.93□□□□□ -0.34
PDE6DO43924 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.93□□□□□ -0.34
PDE6DO43924 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PDE6DO43924 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC12.93□□□□□ -0.34
PDE6DO43924 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
PDE6DO43924 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC12.93□□□□□ -0.34
PDE6DO43924 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PDE6DO43924 RPS20-210ENST00000523936 899 ntTSL 2 BASIC12.93□□□□□ -0.34
PDE6DO43924 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms