Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KCNQ3O43525 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
KCNQ3O43525 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KCNQ3O43525 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KCNQ3O43525 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KCNQ3O43525 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
KCNQ3O43525 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
KCNQ3O43525 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC21.16■□□□□ 0.98
KCNQ3O43525 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC21.16■□□□□ 0.98
KCNQ3O43525 CETN4P-206ENST00000642099 2168 ntBASIC21.16■□□□□ 0.98
KCNQ3O43525 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KCNQ3O43525 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KCNQ3O43525 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KCNQ3O43525 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
KCNQ3O43525 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KCNQ3O43525 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
KCNQ3O43525 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
KCNQ3O43525 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC21.16■□□□□ 0.98
KCNQ3O43525 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KCNQ3O43525 CRB3P1-201ENST00000449338 276 ntBASIC21.16■□□□□ 0.98
KCNQ3O43525 AP002490.2-201ENST00000524791 560 ntBASIC21.16■□□□□ 0.98
KCNQ3O43525 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC21.16■□□□□ 0.98
KCNQ3O43525 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC21.16■□□□□ 0.98
KCNQ3O43525 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KCNQ3O43525 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KCNQ3O43525 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KCNQ3O43525 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
KCNQ3O43525 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KCNQ3O43525 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KCNQ3O43525 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC21.16■□□□□ 0.98
KCNQ3O43525 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KCNQ3O43525 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KCNQ3O43525 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KCNQ3O43525 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC21.15■□□□□ 0.98
KCNQ3O43525 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
KCNQ3O43525 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
KCNQ3O43525 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KCNQ3O43525 AC087499.5-201ENST00000452760 1342 ntBASIC21.15■□□□□ 0.98
KCNQ3O43525 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
KCNQ3O43525 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
KCNQ3O43525 LETM1P2-201ENST00000597330 2178 ntBASIC21.15■□□□□ 0.98
KCNQ3O43525 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KCNQ3O43525 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
KCNQ3O43525 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
KCNQ3O43525 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KCNQ3O43525 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
KCNQ3O43525 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
KCNQ3O43525 RBM39-205ENST00000397370 612 ntTSL 2 BASIC21.15■□□□□ 0.98
KCNQ3O43525 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC21.15■□□□□ 0.98
KCNQ3O43525 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC21.15■□□□□ 0.98
KCNQ3O43525 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC21.15■□□□□ 0.98
KCNQ3O43525 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KCNQ3O43525 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
KCNQ3O43525 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
KCNQ3O43525 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KCNQ3O43525 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC21.15■□□□□ 0.98
KCNQ3O43525 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC21.15■□□□□ 0.98
KCNQ3O43525 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
KCNQ3O43525 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KCNQ3O43525 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
KCNQ3O43525 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
KCNQ3O43525 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
KCNQ3O43525 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KCNQ3O43525 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.14■□□□□ 0.98
KCNQ3O43525 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
KCNQ3O43525 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
KCNQ3O43525 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
KCNQ3O43525 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC21.14■□□□□ 0.98
KCNQ3O43525 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
KCNQ3O43525 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC21.14■□□□□ 0.97
KCNQ3O43525 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
KCNQ3O43525 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KCNQ3O43525 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
KCNQ3O43525 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KCNQ3O43525 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
KCNQ3O43525 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KCNQ3O43525 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
KCNQ3O43525 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC21.14■□□□□ 0.97
KCNQ3O43525 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
KCNQ3O43525 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC21.14■□□□□ 0.97
KCNQ3O43525 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KCNQ3O43525 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC21.14■□□□□ 0.97
KCNQ3O43525 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC21.14■□□□□ 0.97
KCNQ3O43525 AL512361.1-201ENST00000554200 418 ntBASIC21.14■□□□□ 0.97
KCNQ3O43525 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC21.14■□□□□ 0.97
KCNQ3O43525 AC020765.3-201ENST00000613051 740 ntBASIC21.14■□□□□ 0.97
KCNQ3O43525 AL035252.4-201ENST00000624174 288 ntBASIC21.14■□□□□ 0.97
KCNQ3O43525 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KCNQ3O43525 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC21.14■□□□□ 0.97
KCNQ3O43525 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KCNQ3O43525 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
KCNQ3O43525 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KCNQ3O43525 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
KCNQ3O43525 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC21.14■□□□□ 0.97
KCNQ3O43525 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
KCNQ3O43525 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
KCNQ3O43525 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KCNQ3O43525 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
KCNQ3O43525 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
KCNQ3O43525 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms