Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COCHO43405 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
COCHO43405 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COCHO43405 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.12■□□□□ 0.33
COCHO43405 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.12■□□□□ 0.33
COCHO43405 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COCHO43405 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
COCHO43405 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
COCHO43405 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.11■□□□□ 0.33
COCHO43405 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COCHO43405 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
COCHO43405 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COCHO43405 AC080080.1-201ENST00000625121 2420 ntBASIC17.11■□□□□ 0.33
COCHO43405 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COCHO43405 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COCHO43405 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
COCHO43405 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
COCHO43405 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COCHO43405 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COCHO43405 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.11■□□□□ 0.33
COCHO43405 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COCHO43405 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COCHO43405 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
COCHO43405 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.11■□□□□ 0.33
COCHO43405 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COCHO43405 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COCHO43405 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COCHO43405 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COCHO43405 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COCHO43405 FAM220BP-201ENST00000377689 816 ntBASIC17.11■□□□□ 0.33
COCHO43405 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.11■□□□□ 0.33
COCHO43405 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.11■□□□□ 0.33
COCHO43405 AC069120.2-201ENST00000524091 540 ntBASIC17.11■□□□□ 0.33
COCHO43405 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.11■□□□□ 0.33
COCHO43405 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.11■□□□□ 0.33
COCHO43405 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.11■□□□□ 0.33
COCHO43405 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.11■□□□□ 0.33
COCHO43405 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
COCHO43405 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.11■□□□□ 0.33
COCHO43405 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COCHO43405 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COCHO43405 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COCHO43405 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
COCHO43405 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COCHO43405 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COCHO43405 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COCHO43405 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COCHO43405 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.1■□□□□ 0.33
COCHO43405 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.1■□□□□ 0.33
COCHO43405 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COCHO43405 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COCHO43405 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
COCHO43405 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
COCHO43405 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.1■□□□□ 0.33
COCHO43405 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
COCHO43405 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
COCHO43405 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.1■□□□□ 0.33
COCHO43405 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COCHO43405 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.1■□□□□ 0.33
COCHO43405 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COCHO43405 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.1■□□□□ 0.33
COCHO43405 AC092364.2-202ENST00000597012 1073 ntBASIC17.1■□□□□ 0.33
COCHO43405 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
COCHO43405 LINC02084-201ENST00000606069 1096 ntBASIC17.1■□□□□ 0.33
COCHO43405 AL158211.3-201ENST00000607385 239 ntBASIC17.1■□□□□ 0.33
COCHO43405 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.1■□□□□ 0.33
COCHO43405 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COCHO43405 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COCHO43405 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COCHO43405 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COCHO43405 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
COCHO43405 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.1■□□□□ 0.33
COCHO43405 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.1■□□□□ 0.33
COCHO43405 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
COCHO43405 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
COCHO43405 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COCHO43405 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
COCHO43405 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
COCHO43405 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COCHO43405 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COCHO43405 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COCHO43405 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
COCHO43405 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COCHO43405 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COCHO43405 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COCHO43405 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
COCHO43405 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COCHO43405 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COCHO43405 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COCHO43405 BASP1P1-201ENST00000430708 665 ntBASIC17.09■□□□□ 0.33
COCHO43405 AC097493.3-201ENST00000509725 367 ntBASIC17.09■□□□□ 0.33
COCHO43405 RNA5SP421-201ENST00000516864 134 ntBASIC17.09■□□□□ 0.33
COCHO43405 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COCHO43405 MIR3197-201ENST00000582241 73 ntBASIC17.09■□□□□ 0.33
COCHO43405 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.09■□□□□ 0.33
COCHO43405 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COCHO43405 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.09■□□□□ 0.33
COCHO43405 AC007967.4-201ENST00000614700 386 ntBASIC17.09■□□□□ 0.33
COCHO43405 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
COCHO43405 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms