Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.94■□□□□ 0.3
RIPK2O43353 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RIPK2O43353 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RIPK2O43353 PRAL-201ENST00000624952 3286 ntBASIC16.94■□□□□ 0.3
RIPK2O43353 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RIPK2O43353 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RIPK2O43353 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.93■□□□□ 0.3
RIPK2O43353 AC069224.1-201ENST00000566372 1715 ntBASIC16.93■□□□□ 0.3
RIPK2O43353 LINC01144-201ENST00000626198 1710 ntBASIC16.93■□□□□ 0.3
RIPK2O43353 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RIPK2O43353 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RIPK2O43353 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.93■□□□□ 0.3
RIPK2O43353 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RIPK2O43353 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RIPK2O43353 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RIPK2O43353 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RIPK2O43353 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RIPK2O43353 GPAA1P2-202ENST00000606848 1787 ntBASIC16.93■□□□□ 0.3
RIPK2O43353 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RIPK2O43353 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RIPK2O43353 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
RIPK2O43353 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.93■□□□□ 0.3
RIPK2O43353 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.93■□□□□ 0.3
RIPK2O43353 BX276092.5-203ENST00000456199 560 ntBASIC16.93■□□□□ 0.3
RIPK2O43353 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.93■□□□□ 0.3
RIPK2O43353 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.93■□□□□ 0.3
RIPK2O43353 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
RIPK2O43353 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.93■□□□□ 0.3
RIPK2O43353 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
RIPK2O43353 AL121672.3-201ENST00000608644 468 ntBASIC16.93■□□□□ 0.3
RIPK2O43353 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RIPK2O43353 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RIPK2O43353 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.93■□□□□ 0.3
RIPK2O43353 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RIPK2O43353 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RIPK2O43353 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RIPK2O43353 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RIPK2O43353 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.93■□□□□ 0.3
RIPK2O43353 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.93■□□□□ 0.3
RIPK2O43353 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.93■□□□□ 0.3
RIPK2O43353 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RIPK2O43353 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RIPK2O43353 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RIPK2O43353 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RIPK2O43353 PPT1-215ENST00000641471 2368 ntBASIC16.93■□□□□ 0.3
RIPK2O43353 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.93■□□□□ 0.3
RIPK2O43353 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RIPK2O43353 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RIPK2O43353 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RIPK2O43353 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RIPK2O43353 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RIPK2O43353 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RIPK2O43353 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RIPK2O43353 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RIPK2O43353 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RIPK2O43353 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RIPK2O43353 AC016734.2-201ENST00000624325 1377 ntBASIC16.92■□□□□ 0.3
RIPK2O43353 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RIPK2O43353 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RIPK2O43353 NSUN5P1-202ENST00000421140 1535 ntBASIC16.92■□□□□ 0.3
RIPK2O43353 NSUN5P2-203ENST00000457352 1529 ntBASIC16.92■□□□□ 0.3
RIPK2O43353 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RIPK2O43353 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RIPK2O43353 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RIPK2O43353 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RIPK2O43353 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RIPK2O43353 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RIPK2O43353 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RIPK2O43353 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RIPK2O43353 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.92■□□□□ 0.3
RIPK2O43353 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.92■□□□□ 0.3
RIPK2O43353 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RIPK2O43353 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RIPK2O43353 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RIPK2O43353 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.92■□□□□ 0.3
RIPK2O43353 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.92■□□□□ 0.3
RIPK2O43353 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.92■□□□□ 0.3
RIPK2O43353 Z69720.1-201ENST00000601483 472 ntBASIC16.92■□□□□ 0.3
RIPK2O43353 AC010331.1-201ENST00000611423 582 ntBASIC16.92■□□□□ 0.3
RIPK2O43353 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RIPK2O43353 AC114341.1-201ENST00000618070 349 ntBASIC16.92■□□□□ 0.3
RIPK2O43353 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.92■□□□□ 0.3
RIPK2O43353 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RIPK2O43353 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RIPK2O43353 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RIPK2O43353 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RIPK2O43353 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.92■□□□□ 0.3
RIPK2O43353 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RIPK2O43353 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RIPK2O43353 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RIPK2O43353 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIPK2O43353 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RIPK2O43353 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIPK2O43353 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIPK2O43353 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.91■□□□□ 0.3
RIPK2O43353 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIPK2O43353 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RIPK2O43353 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIPK2O43353 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RIPK2O43353 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms