Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PFDN6O15212 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PFDN6O15212 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.73■□□□□ 0.27
PFDN6O15212 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.73■□□□□ 0.27
PFDN6O15212 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PFDN6O15212 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.73■□□□□ 0.27
PFDN6O15212 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PFDN6O15212 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PFDN6O15212 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.73■□□□□ 0.27
PFDN6O15212 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.73■□□□□ 0.27
PFDN6O15212 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PFDN6O15212 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PFDN6O15212 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PFDN6O15212 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PFDN6O15212 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN6O15212 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN6O15212 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN6O15212 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN6O15212 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN6O15212 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN6O15212 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN6O15212 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN6O15212 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN6O15212 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.72■□□□□ 0.27
PFDN6O15212 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.72■□□□□ 0.27
PFDN6O15212 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.72■□□□□ 0.27
PFDN6O15212 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN6O15212 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.72■□□□□ 0.27
PFDN6O15212 MIR600HG-201ENST00000449175 5984 ntBASIC16.72■□□□□ 0.27
PFDN6O15212 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PFDN6O15212 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN6O15212 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
PFDN6O15212 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN6O15212 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN6O15212 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN6O15212 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.72■□□□□ 0.27
PFDN6O15212 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.72■□□□□ 0.27
PFDN6O15212 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.72■□□□□ 0.27
PFDN6O15212 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.72■□□□□ 0.27
PFDN6O15212 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.72■□□□□ 0.27
PFDN6O15212 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN6O15212 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.72■□□□□ 0.27
PFDN6O15212 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN6O15212 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
PFDN6O15212 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN6O15212 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PFDN6O15212 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN6O15212 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PFDN6O15212 AC068418.2-201ENST00000577309 3703 ntBASIC16.72■□□□□ 0.27
PFDN6O15212 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN6O15212 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PFDN6O15212 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN6O15212 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.71■□□□□ 0.27
PFDN6O15212 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PFDN6O15212 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN6O15212 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.71■□□□□ 0.27
PFDN6O15212 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.71■□□□□ 0.27
PFDN6O15212 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN6O15212 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN6O15212 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN6O15212 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.71■□□□□ 0.27
PFDN6O15212 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PFDN6O15212 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN6O15212 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PFDN6O15212 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.71■□□□□ 0.27
PFDN6O15212 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.71■□□□□ 0.27
PFDN6O15212 AC079781.3-201ENST00000449110 356 ntBASIC16.71■□□□□ 0.27
PFDN6O15212 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.71■□□□□ 0.27
PFDN6O15212 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.71■□□□□ 0.27
PFDN6O15212 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PFDN6O15212 AL031008.1-201ENST00000619963 541 ntBASIC16.71■□□□□ 0.27
PFDN6O15212 FAM215A-202ENST00000632077 792 ntBASIC16.71■□□□□ 0.27
PFDN6O15212 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN6O15212 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.71■□□□□ 0.27
PFDN6O15212 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PFDN6O15212 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.71■□□□□ 0.27
PFDN6O15212 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PFDN6O15212 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.71■□□□□ 0.27
PFDN6O15212 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN6O15212 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
PFDN6O15212 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN6O15212 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
PFDN6O15212 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PFDN6O15212 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
PFDN6O15212 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.71■□□□□ 0.26
PFDN6O15212 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PFDN6O15212 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN6O15212 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN6O15212 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.7■□□□□ 0.26
PFDN6O15212 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN6O15212 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN6O15212 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN6O15212 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN6O15212 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN6O15212 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN6O15212 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN6O15212 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN6O15212 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.7■□□□□ 0.26
PFDN6O15212 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PFDN6O15212 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms