Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A1O14983 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.97■□□□□ 0.63
ATP2A1O14983 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A1O14983 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A1O14983 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A1O14983 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
ATP2A1O14983 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.97■□□□□ 0.63
ATP2A1O14983 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ATP2A1O14983 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A1O14983 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A1O14983 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ATP2A1O14983 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A1O14983 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A1O14983 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.97■□□□□ 0.63
ATP2A1O14983 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A1O14983 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ATP2A1O14983 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.97■□□□□ 0.63
ATP2A1O14983 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.97■□□□□ 0.63
ATP2A1O14983 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A1O14983 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A1O14983 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ATP2A1O14983 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.97■□□□□ 0.63
ATP2A1O14983 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A1O14983 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.97■□□□□ 0.63
ATP2A1O14983 AL138828.2-201ENST00000615812 383 ntBASIC18.97■□□□□ 0.63
ATP2A1O14983 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A1O14983 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.97■□□□□ 0.63
ATP2A1O14983 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.97■□□□□ 0.63
ATP2A1O14983 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
ATP2A1O14983 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.97■□□□□ 0.63
ATP2A1O14983 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
ATP2A1O14983 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.97■□□□□ 0.63
ATP2A1O14983 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ATP2A1O14983 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A1O14983 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A1O14983 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATP2A1O14983 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ATP2A1O14983 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2A1O14983 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2A1O14983 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2A1O14983 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.96■□□□□ 0.63
ATP2A1O14983 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.96■□□□□ 0.63
ATP2A1O14983 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.96■□□□□ 0.63
ATP2A1O14983 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
ATP2A1O14983 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
ATP2A1O14983 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2A1O14983 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2A1O14983 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2A1O14983 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2A1O14983 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2A1O14983 AL353705.2-201ENST00000428243 662 ntBASIC18.96■□□□□ 0.63
ATP2A1O14983 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2A1O14983 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2A1O14983 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2A1O14983 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.96■□□□□ 0.63
ATP2A1O14983 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.96■□□□□ 0.63
ATP2A1O14983 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.96■□□□□ 0.63
ATP2A1O14983 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.96■□□□□ 0.63
ATP2A1O14983 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.96■□□□□ 0.63
ATP2A1O14983 AF228730.6-201ENST00000641497 218 ntBASIC18.96■□□□□ 0.63
ATP2A1O14983 AC084121.3-201ENST00000641716 218 ntBASIC18.96■□□□□ 0.63
ATP2A1O14983 AC105233.6-201ENST00000642093 218 ntBASIC18.96■□□□□ 0.63
ATP2A1O14983 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP2A1O14983 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
ATP2A1O14983 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2A1O14983 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP2A1O14983 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
ATP2A1O14983 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2A1O14983 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.96■□□□□ 0.63
ATP2A1O14983 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATP2A1O14983 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.62
ATP2A1O14983 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A1O14983 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A1O14983 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A1O14983 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A1O14983 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A1O14983 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A1O14983 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A1O14983 AL391256.1-201ENST00000443260 1855 ntBASIC18.95■□□□□ 0.62
ATP2A1O14983 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A1O14983 AC015922.1-201ENST00000421102 1152 ntBASIC18.95■□□□□ 0.62
ATP2A1O14983 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.95■□□□□ 0.62
ATP2A1O14983 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.95■□□□□ 0.62
ATP2A1O14983 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.95■□□□□ 0.62
ATP2A1O14983 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.95■□□□□ 0.62
ATP2A1O14983 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.95■□□□□ 0.62
ATP2A1O14983 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.95■□□□□ 0.62
ATP2A1O14983 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ATP2A1O14983 AL023806.1-201ENST00000603994 1649 ntBASIC18.95■□□□□ 0.62
ATP2A1O14983 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A1O14983 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ATP2A1O14983 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A1O14983 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A1O14983 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A1O14983 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A1O14983 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A1O14983 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.95■□□□□ 0.62
ATP2A1O14983 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A1O14983 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ATP2A1O14983 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms