Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK2O00526 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.38□□□□□ -0.27
UPK2O00526 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.38□□□□□ -0.27
UPK2O00526 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
UPK2O00526 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK2O00526 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK2O00526 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.38□□□□□ -0.27
UPK2O00526 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
UPK2O00526 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.38□□□□□ -0.27
UPK2O00526 RPS15P9-201ENST00000494093 319 ntBASIC13.38□□□□□ -0.27
UPK2O00526 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC13.38□□□□□ -0.27
UPK2O00526 AF238378.1-201ENST00000526806 358 ntBASIC13.38□□□□□ -0.27
UPK2O00526 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.38□□□□□ -0.27
UPK2O00526 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.38□□□□□ -0.27
UPK2O00526 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.38□□□□□ -0.27
UPK2O00526 AC087641.1-201ENST00000557561 1021 ntBASIC13.38□□□□□ -0.27
UPK2O00526 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.38□□□□□ -0.27
UPK2O00526 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK2O00526 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.38□□□□□ -0.27
UPK2O00526 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.38□□□□□ -0.27
UPK2O00526 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.38□□□□□ -0.27
UPK2O00526 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.38□□□□□ -0.27
UPK2O00526 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK2O00526 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UPK2O00526 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK2O00526 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.38□□□□□ -0.27
UPK2O00526 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
UPK2O00526 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UPK2O00526 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UPK2O00526 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK2O00526 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
UPK2O00526 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK2O00526 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UPK2O00526 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
UPK2O00526 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK2O00526 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
UPK2O00526 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK2O00526 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK2O00526 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UPK2O00526 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.38□□□□□ -0.27
UPK2O00526 AC129492.6-201ENST00000611383 1305 ntBASIC13.38□□□□□ -0.27
UPK2O00526 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK2O00526 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.38□□□□□ -0.27
UPK2O00526 GPAA1P2-202ENST00000606848 1787 ntBASIC13.37□□□□□ -0.27
UPK2O00526 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK2O00526 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK2O00526 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.37□□□□□ -0.27
UPK2O00526 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK2O00526 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK2O00526 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
UPK2O00526 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.37□□□□□ -0.27
UPK2O00526 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
UPK2O00526 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
UPK2O00526 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK2O00526 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
UPK2O00526 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK2O00526 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UPK2O00526 LINC01144-201ENST00000626198 1710 ntBASIC13.37□□□□□ -0.27
UPK2O00526 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK2O00526 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.37□□□□□ -0.27
UPK2O00526 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.37□□□□□ -0.27
UPK2O00526 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.37□□□□□ -0.27
UPK2O00526 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
UPK2O00526 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UPK2O00526 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UPK2O00526 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UPK2O00526 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
UPK2O00526 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
UPK2O00526 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UPK2O00526 POU5F1P6-201ENST00000466990 990 ntBASIC13.37□□□□□ -0.27
UPK2O00526 AC107918.2-201ENST00000530817 355 ntBASIC13.37□□□□□ -0.27
UPK2O00526 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UPK2O00526 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.37□□□□□ -0.27
UPK2O00526 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.37□□□□□ -0.27
UPK2O00526 AC005412.3-201ENST00000580309 715 ntBASIC13.37□□□□□ -0.27
UPK2O00526 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK2O00526 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.37□□□□□ -0.27
UPK2O00526 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
UPK2O00526 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.37□□□□□ -0.27
UPK2O00526 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.37□□□□□ -0.27
UPK2O00526 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
UPK2O00526 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.37□□□□□ -0.27
UPK2O00526 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.37□□□□□ -0.27
UPK2O00526 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UPK2O00526 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK2O00526 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
UPK2O00526 PCGF3-213ENST00000620529 1899 ntBASIC13.37□□□□□ -0.27
UPK2O00526 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.37□□□□□ -0.27
UPK2O00526 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK2O00526 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK2O00526 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.37□□□□□ -0.27
UPK2O00526 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
UPK2O00526 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK2O00526 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
UPK2O00526 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.37□□□□□ -0.27
UPK2O00526 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.37□□□□□ -0.27
UPK2O00526 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK2O00526 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
UPK2O00526 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK2O00526 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms