Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AL391005.1-201ENST00000623953 2435 ntBASIC16.84■□□□□ 0.29
AP3B1O00203 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP3B1O00203 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3B1O00203 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.84■□□□□ 0.29
AP3B1O00203 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.84■□□□□ 0.29
AP3B1O00203 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
AP3B1O00203 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP3B1O00203 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3B1O00203 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.84■□□□□ 0.29
AP3B1O00203 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
AP3B1O00203 MIR4515-201ENST00000584082 81 ntBASIC16.84■□□□□ 0.29
AP3B1O00203 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.84■□□□□ 0.29
AP3B1O00203 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.84■□□□□ 0.29
AP3B1O00203 AC046158.3-201ENST00000624947 2558 ntBASIC16.84■□□□□ 0.29
AP3B1O00203 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3B1O00203 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP3B1O00203 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP3B1O00203 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP3B1O00203 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.84■□□□□ 0.29
AP3B1O00203 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
AP3B1O00203 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3B1O00203 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.84■□□□□ 0.29
AP3B1O00203 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
AP3B1O00203 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP3B1O00203 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3B1O00203 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.84■□□□□ 0.29
AP3B1O00203 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
AP3B1O00203 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
AP3B1O00203 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
AP3B1O00203 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.83■□□□□ 0.29
AP3B1O00203 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
AP3B1O00203 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
AP3B1O00203 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
AP3B1O00203 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.83■□□□□ 0.28
AP3B1O00203 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3B1O00203 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3B1O00203 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
AP3B1O00203 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.83■□□□□ 0.28
AP3B1O00203 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP3B1O00203 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
AP3B1O00203 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP3B1O00203 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3B1O00203 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
AP3B1O00203 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
AP3B1O00203 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3B1O00203 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.83■□□□□ 0.28
AP3B1O00203 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.83■□□□□ 0.28
AP3B1O00203 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.83■□□□□ 0.28
AP3B1O00203 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.83■□□□□ 0.28
AP3B1O00203 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP3B1O00203 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
AP3B1O00203 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.83■□□□□ 0.28
AP3B1O00203 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.83■□□□□ 0.28
AP3B1O00203 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.83■□□□□ 0.28
AP3B1O00203 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.83■□□□□ 0.28
AP3B1O00203 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
AP3B1O00203 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.83■□□□□ 0.28
AP3B1O00203 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3B1O00203 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP3B1O00203 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.83■□□□□ 0.28
AP3B1O00203 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3B1O00203 MIR3909-201ENST00000579518 119 ntBASIC16.83■□□□□ 0.28
AP3B1O00203 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP3B1O00203 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.83■□□□□ 0.28
AP3B1O00203 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.83■□□□□ 0.28
AP3B1O00203 AL691432.3-201ENST00000621860 400 ntBASIC16.83■□□□□ 0.28
AP3B1O00203 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
AP3B1O00203 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3B1O00203 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.83■□□□□ 0.28
AP3B1O00203 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
AP3B1O00203 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
AP3B1O00203 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3B1O00203 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3B1O00203 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3B1O00203 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.82■□□□□ 0.28
AP3B1O00203 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3B1O00203 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3B1O00203 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3B1O00203 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3B1O00203 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3B1O00203 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.82■□□□□ 0.28
AP3B1O00203 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3B1O00203 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3B1O00203 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3B1O00203 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3B1O00203 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3B1O00203 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3B1O00203 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3B1O00203 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3B1O00203 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.82■□□□□ 0.28
AP3B1O00203 HNRNPDP1-201ENST00000439535 754 ntBASIC16.82■□□□□ 0.28
AP3B1O00203 FAM185BP-201ENST00000443595 716 ntBASIC16.82■□□□□ 0.28
AP3B1O00203 AC108073.2-201ENST00000464002 357 ntBASIC16.82■□□□□ 0.28
AP3B1O00203 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.82■□□□□ 0.28
AP3B1O00203 AC093909.1-201ENST00000504731 1122 ntBASIC16.82■□□□□ 0.28
AP3B1O00203 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
AP3B1O00203 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
AP3B1O00203 AC021097.1-201ENST00000607902 574 ntBASIC16.82■□□□□ 0.28
AP3B1O00203 AL645728.2-201ENST00000641974 660 ntBASIC16.82■□□□□ 0.28
AP3B1O00203 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms