Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
COLCA2A8K830 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COLCA2A8K830 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COLCA2A8K830 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
COLCA2A8K830 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COLCA2A8K830 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COLCA2A8K830 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
COLCA2A8K830 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
COLCA2A8K830 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC12.77□□□□□ -0.37
COLCA2A8K830 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
COLCA2A8K830 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
COLCA2A8K830 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC12.77□□□□□ -0.37
COLCA2A8K830 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
COLCA2A8K830 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COLCA2A8K830 MIR3180-5-201ENST00000583743 153 ntBASIC12.77□□□□□ -0.37
COLCA2A8K830 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COLCA2A8K830 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC12.77□□□□□ -0.37
COLCA2A8K830 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
COLCA2A8K830 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
COLCA2A8K830 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
COLCA2A8K830 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COLCA2A8K830 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.77□□□□□ -0.37
COLCA2A8K830 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COLCA2A8K830 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COLCA2A8K830 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COLCA2A8K830 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.77□□□□□ -0.37
COLCA2A8K830 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COLCA2A8K830 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COLCA2A8K830 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COLCA2A8K830 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
COLCA2A8K830 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.77□□□□□ -0.37
COLCA2A8K830 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COLCA2A8K830 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
COLCA2A8K830 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
COLCA2A8K830 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
COLCA2A8K830 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
COLCA2A8K830 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
COLCA2A8K830 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.76□□□□□ -0.37
COLCA2A8K830 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.76□□□□□ -0.37
COLCA2A8K830 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
COLCA2A8K830 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
COLCA2A8K830 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
COLCA2A8K830 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC12.76□□□□□ -0.37
COLCA2A8K830 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 AC091390.4-202ENST00000476426 537 ntBASIC12.76□□□□□ -0.37
COLCA2A8K830 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC12.76□□□□□ -0.37
COLCA2A8K830 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC12.76□□□□□ -0.37
COLCA2A8K830 OR10C1-204ENST00000622521 1039 ntBASIC12.76□□□□□ -0.37
COLCA2A8K830 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC12.76□□□□□ -0.37
COLCA2A8K830 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC12.76□□□□□ -0.37
COLCA2A8K830 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
COLCA2A8K830 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.76□□□□□ -0.37
COLCA2A8K830 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.76□□□□□ -0.37
COLCA2A8K830 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
COLCA2A8K830 AC112693.3-201ENST00000624819 1983 ntBASIC12.76□□□□□ -0.37
COLCA2A8K830 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
COLCA2A8K830 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.76□□□□□ -0.37
COLCA2A8K830 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COLCA2A8K830 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
COLCA2A8K830 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
COLCA2A8K830 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
COLCA2A8K830 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
COLCA2A8K830 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.75□□□□□ -0.37
COLCA2A8K830 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COLCA2A8K830 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
COLCA2A8K830 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
COLCA2A8K830 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.75□□□□□ -0.37
COLCA2A8K830 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
COLCA2A8K830 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
COLCA2A8K830 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.75□□□□□ -0.37
COLCA2A8K830 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.75□□□□□ -0.37
COLCA2A8K830 GPR89P-201ENST00000407924 1495 ntBASIC12.75□□□□□ -0.37
COLCA2A8K830 AC073869.1-201ENST00000415574 2762 ntBASIC12.75□□□□□ -0.37
COLCA2A8K830 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms