Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGB6Q9Y5F9 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
PCDHGB6Q9Y5F9 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
PCDHGB6Q9Y5F9 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDHGB6Q9Y5F9 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDHGB6Q9Y5F9 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 PTCHD3P3-201ENST00000403073 906 ntBASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 AC023274.1-201ENST00000418278 595 ntBASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 HMGN1P19-201ENST00000436976 333 ntBASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 AP006288.1-201ENST00000446065 395 ntBASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 YBX1P5-201ENST00000509441 847 ntBASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 AC005829.1-201ENST00000570002 483 ntBASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 AP001160.2-201ENST00000596071 487 ntBASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 LINC02084-201ENST00000606069 1096 ntBASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGB6Q9Y5F9 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 MKNK2P1-201ENST00000437526 628 ntBASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 AC096734.2-201ENST00000562054 433 ntBASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGB6Q9Y5F9 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGB6Q9Y5F9 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGB6Q9Y5F9 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PCDHGB6Q9Y5F9 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGB6Q9Y5F9 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGB6Q9Y5F9 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB6Q9Y5F9 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB6Q9Y5F9 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB6Q9Y5F9 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGB6Q9Y5F9 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGB6Q9Y5F9 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB6Q9Y5F9 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGB6Q9Y5F9 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGB6Q9Y5F9 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB6Q9Y5F9 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB6Q9Y5F9 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB6Q9Y5F9 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB6Q9Y5F9 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGB6Q9Y5F9 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGB6Q9Y5F9 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms