Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 LINC02084-201ENST00000606069 1096 ntBASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 AL512652.2-201ENST00000625156 1716 ntBASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
DENND2AQ9ULE3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
DENND2AQ9ULE3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DENND2AQ9ULE3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
DENND2AQ9ULE3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.08■□□□□ 0.81
DENND2AQ9ULE3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DENND2AQ9ULE3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.08■□□□□ 0.81
DENND2AQ9ULE3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
DENND2AQ9ULE3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.08■□□□□ 0.81
DENND2AQ9ULE3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.08■□□□□ 0.81
DENND2AQ9ULE3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
DENND2AQ9ULE3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
DENND2AQ9ULE3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
DENND2AQ9ULE3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC20.08■□□□□ 0.81
DENND2AQ9ULE3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DENND2AQ9ULE3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
DENND2AQ9ULE3 PPP6R2P1-201ENST00000450880 1275 ntBASIC20.08■□□□□ 0.81
DENND2AQ9ULE3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC20.08■□□□□ 0.81
DENND2AQ9ULE3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC20.08■□□□□ 0.81
DENND2AQ9ULE3 MIR4453-201ENST00000584019 89 ntBASIC20.08■□□□□ 0.81
DENND2AQ9ULE3 AC018529.1-201ENST00000613063 361 ntBASIC20.08■□□□□ 0.81
DENND2AQ9ULE3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
DENND2AQ9ULE3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
DENND2AQ9ULE3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.08■□□□□ 0.8
DENND2AQ9ULE3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
DENND2AQ9ULE3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
DENND2AQ9ULE3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.08■□□□□ 0.8
DENND2AQ9ULE3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
DENND2AQ9ULE3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC20.08■□□□□ 0.8
DENND2AQ9ULE3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
DENND2AQ9ULE3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
DENND2AQ9ULE3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
DENND2AQ9ULE3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
DENND2AQ9ULE3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
DENND2AQ9ULE3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 AC093214.1-201ENST00000511688 1107 ntBASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 RNA5SP421-201ENST00000516864 134 ntBASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 SPTSSB-204ENST00000617024 1292 ntBASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 AC105020.1-201ENST00000435356 2205 ntBASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DENND2AQ9ULE3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
DENND2AQ9ULE3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.06■□□□□ 0.8
DENND2AQ9ULE3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DENND2AQ9ULE3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DENND2AQ9ULE3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms