Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 IGLL3P-201ENST00000412472 434 ntBASIC14.13□□□□□ -0.15
CLN8Q9UBY8 AC023274.1-201ENST00000418278 595 ntBASIC14.13□□□□□ -0.15
CLN8Q9UBY8 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 KRT18P2-201ENST00000447938 1258 ntBASIC14.13□□□□□ -0.15
CLN8Q9UBY8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 SLC25A6P2-201ENST00000497974 877 ntBASIC14.13□□□□□ -0.15
CLN8Q9UBY8 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 BCAR1-209ENST00000546196 1340 ntBASIC14.13□□□□□ -0.15
CLN8Q9UBY8 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLN8Q9UBY8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 MIR3687-2-201ENST00000577708 61 ntBASIC14.12□□□□□ -0.15
CLN8Q9UBY8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 MTDHP5-201ENST00000598980 586 ntBASIC14.12□□□□□ -0.15
CLN8Q9UBY8 AC023141.13-201ENST00000604991 943 ntBASIC14.12□□□□□ -0.15
CLN8Q9UBY8 MIR3687-1-201ENST00000614492 61 ntBASIC14.12□□□□□ -0.15
CLN8Q9UBY8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 TUBB8P12-201ENST00000308911 1335 ntBASIC14.12□□□□□ -0.15
CLN8Q9UBY8 TUBB7P-202ENST00000428444 1305 ntBASIC14.12□□□□□ -0.15
CLN8Q9UBY8 TUBB8P7-204ENST00000567960 1332 ntBASIC14.12□□□□□ -0.15
CLN8Q9UBY8 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLN8Q9UBY8 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLN8Q9UBY8 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLN8Q9UBY8 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CLN8Q9UBY8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CLN8Q9UBY8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLN8Q9UBY8 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLN8Q9UBY8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms