Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 AC020916.1-201ENST00000587762 1774 ntBASIC16.47■□□□□ 0.23
NCDNQ9UBB6 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 BNIP3P42-201ENST00000454982 569 ntBASIC16.47■□□□□ 0.23
NCDNQ9UBB6 RN7SL618P-201ENST00000477850 296 ntBASIC16.47■□□□□ 0.23
NCDNQ9UBB6 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 KRT18P34-201ENST00000488218 1270 ntBASIC16.47■□□□□ 0.23
NCDNQ9UBB6 AC104989.1-201ENST00000519711 778 ntBASIC16.47■□□□□ 0.23
NCDNQ9UBB6 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 BNIP3P29-201ENST00000598302 571 ntBASIC16.47■□□□□ 0.23
NCDNQ9UBB6 AC011447.5-201ENST00000616168 564 ntBASIC16.47■□□□□ 0.23
NCDNQ9UBB6 AL109936.8-201ENST00000641772 604 ntBASIC16.47■□□□□ 0.23
NCDNQ9UBB6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 SLC7A15P-201ENST00000424028 1363 ntBASIC16.47■□□□□ 0.23
NCDNQ9UBB6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NCDNQ9UBB6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 BOLA2P3-201ENST00000404566 256 ntBASIC16.46■□□□□ 0.23
NCDNQ9UBB6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 AC007389.4-201ENST00000454674 793 ntBASIC16.46■□□□□ 0.23
NCDNQ9UBB6 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 AL139327.4-201ENST00000612362 153 ntBASIC16.46■□□□□ 0.23
NCDNQ9UBB6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
NCDNQ9UBB6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.22
NCDNQ9UBB6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
NCDNQ9UBB6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCDNQ9UBB6 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.45■□□□□ 0.22
NCDNQ9UBB6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NCDNQ9UBB6 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCDNQ9UBB6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCDNQ9UBB6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
NCDNQ9UBB6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCDNQ9UBB6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
NCDNQ9UBB6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NCDNQ9UBB6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms