Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SLC52A1Q9NWF4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SLC52A1Q9NWF4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SLC52A1Q9NWF4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SLC52A1Q9NWF4 GGT4P-201ENST00000623672 1708 ntBASIC23.5■■□□□ 1.35
SLC52A1Q9NWF4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SLC52A1Q9NWF4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
SLC52A1Q9NWF4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC23.5■■□□□ 1.35
SLC52A1Q9NWF4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SLC52A1Q9NWF4 BOLA2P3-201ENST00000404566 256 ntBASIC23.5■■□□□ 1.35
SLC52A1Q9NWF4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
SLC52A1Q9NWF4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC23.5■■□□□ 1.35
SLC52A1Q9NWF4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC23.5■■□□□ 1.35
SLC52A1Q9NWF4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC23.5■■□□□ 1.35
SLC52A1Q9NWF4 KRT223P-202ENST00000449164 1292 ntBASIC23.5■■□□□ 1.35
SLC52A1Q9NWF4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC23.5■■□□□ 1.35
SLC52A1Q9NWF4 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC23.5■■□□□ 1.35
SLC52A1Q9NWF4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC23.5■■□□□ 1.35
SLC52A1Q9NWF4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC23.5■■□□□ 1.35
SLC52A1Q9NWF4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
SLC52A1Q9NWF4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SLC52A1Q9NWF4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
SLC52A1Q9NWF4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC23.5■■□□□ 1.35
SLC52A1Q9NWF4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC23.5■■□□□ 1.35
SLC52A1Q9NWF4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC23.5■■□□□ 1.35
SLC52A1Q9NWF4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SLC52A1Q9NWF4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 TIMM17BP1-201ENST00000545713 516 ntBASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 AC092552.1-201ENST00000547243 906 ntBASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 CDC14C-201ENST00000428251 1719 ntBASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC23.49■■□□□ 1.35
SLC52A1Q9NWF4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SLC52A1Q9NWF4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC23.48■■□□□ 1.35
SLC52A1Q9NWF4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SLC52A1Q9NWF4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC23.48■■□□□ 1.35
SLC52A1Q9NWF4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC23.48■■□□□ 1.35
SLC52A1Q9NWF4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
SLC52A1Q9NWF4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SLC52A1Q9NWF4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SLC52A1Q9NWF4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC23.48■■□□□ 1.35
SLC52A1Q9NWF4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
SLC52A1Q9NWF4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SLC52A1Q9NWF4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
SLC52A1Q9NWF4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC23.48■■□□□ 1.35
SLC52A1Q9NWF4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SLC52A1Q9NWF4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC23.48■■□□□ 1.35
SLC52A1Q9NWF4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC23.48■■□□□ 1.35
SLC52A1Q9NWF4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC23.48■■□□□ 1.35
SLC52A1Q9NWF4 AC133552.6-201ENST00000613406 534 ntBASIC23.48■■□□□ 1.35
SLC52A1Q9NWF4 RPSAP52-203ENST00000622976 1023 ntBASIC23.48■■□□□ 1.35
SLC52A1Q9NWF4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SLC52A1Q9NWF4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
SLC52A1Q9NWF4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
SLC52A1Q9NWF4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
SLC52A1Q9NWF4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC23.48■■□□□ 1.35
SLC52A1Q9NWF4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SLC52A1Q9NWF4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SLC52A1Q9NWF4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
SLC52A1Q9NWF4 FST-202ENST00000396947 2538 ntTSL 5 BASIC23.47■■□□□ 1.35
SLC52A1Q9NWF4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SLC52A1Q9NWF4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC23.47■■□□□ 1.35
SLC52A1Q9NWF4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC23.47■■□□□ 1.35
SLC52A1Q9NWF4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC23.47■■□□□ 1.35
SLC52A1Q9NWF4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SLC52A1Q9NWF4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC23.47■■□□□ 1.35
SLC52A1Q9NWF4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC23.47■■□□□ 1.35
SLC52A1Q9NWF4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
SLC52A1Q9NWF4 AL391069.4-201ENST00000609583 481 ntBASIC23.47■■□□□ 1.35
SLC52A1Q9NWF4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SLC52A1Q9NWF4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC23.47■■□□□ 1.35
SLC52A1Q9NWF4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
SLC52A1Q9NWF4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SLC52A1Q9NWF4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SLC52A1Q9NWF4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
SLC52A1Q9NWF4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms