Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 RPS15P9-201ENST00000494093 319 ntBASIC15.37■□□□□ 0.05
TRIM2Q9C040 AC136632.2-201ENST00000512891 861 ntBASIC15.37■□□□□ 0.05
TRIM2Q9C040 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM2Q9C040 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM2Q9C040 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM2Q9C040 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.37■□□□□ 0.05
TRIM2Q9C040 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.37■□□□□ 0.05
TRIM2Q9C040 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.37■□□□□ 0.05
TRIM2Q9C040 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM2Q9C040 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM2Q9C040 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TRIM2Q9C040 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM2Q9C040 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
TRIM2Q9C040 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.37■□□□□ 0.05
TRIM2Q9C040 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.37■□□□□ 0.05
TRIM2Q9C040 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM2Q9C040 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRIM2Q9C040 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM2Q9C040 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM2Q9C040 AC079328.2-201ENST00000561241 3354 ntBASIC15.37■□□□□ 0.05
TRIM2Q9C040 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM2Q9C040 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM2Q9C040 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM2Q9C040 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM2Q9C040 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM2Q9C040 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
TRIM2Q9C040 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRIM2Q9C040 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
TRIM2Q9C040 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.37■□□□□ 0.05
TRIM2Q9C040 CYP2T1P-202ENST00000641596 2535 ntBASIC15.37■□□□□ 0.05
TRIM2Q9C040 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TRIM2Q9C040 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM2Q9C040 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRIM2Q9C040 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM2Q9C040 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM2Q9C040 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM2Q9C040 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM2Q9C040 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM2Q9C040 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM2Q9C040 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM2Q9C040 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM2Q9C040 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.36■□□□□ 0.05
TRIM2Q9C040 KRT18P27-201ENST00000427733 1299 ntBASIC15.36■□□□□ 0.05
TRIM2Q9C040 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM2Q9C040 RPS2P1-201ENST00000434010 821 ntBASIC15.36■□□□□ 0.05
TRIM2Q9C040 SLC25A6P2-201ENST00000497974 877 ntBASIC15.36■□□□□ 0.05
TRIM2Q9C040 RNPS1P1-201ENST00000507437 918 ntBASIC15.36■□□□□ 0.05
TRIM2Q9C040 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM2Q9C040 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.36■□□□□ 0.05
TRIM2Q9C040 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM2Q9C040 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM2Q9C040 MIR1199-201ENST00000621445 119 ntBASIC15.36■□□□□ 0.05
TRIM2Q9C040 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM2Q9C040 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM2Q9C040 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM2Q9C040 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.36■□□□□ 0.05
TRIM2Q9C040 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM2Q9C040 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM2Q9C040 AC129492.6-201ENST00000611383 1305 ntBASIC15.36■□□□□ 0.05
TRIM2Q9C040 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM2Q9C040 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.36■□□□□ 0.05
TRIM2Q9C040 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM2Q9C040 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM2Q9C040 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM2Q9C040 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.36■□□□□ 0.05
TRIM2Q9C040 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM2Q9C040 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRIM2Q9C040 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM2Q9C040 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM2Q9C040 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRIM2Q9C040 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM2Q9C040 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM2Q9C040 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM2Q9C040 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM2Q9C040 KRT8P39-201ENST00000396270 1433 ntBASIC15.35■□□□□ 0.05
TRIM2Q9C040 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM2Q9C040 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM2Q9C040 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.35■□□□□ 0.05
TRIM2Q9C040 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM2Q9C040 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM2Q9C040 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM2Q9C040 AL353732.1-201ENST00000569618 1459 ntBASIC15.35■□□□□ 0.05
TRIM2Q9C040 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM2Q9C040 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM2Q9C040 AC131009.4-201ENST00000624048 1740 ntBASIC15.35■□□□□ 0.05
TRIM2Q9C040 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM2Q9C040 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRIM2Q9C040 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM2Q9C040 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM2Q9C040 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRIM2Q9C040 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRIM2Q9C040 AC073621.1-201ENST00000392730 636 ntBASIC15.35■□□□□ 0.05
TRIM2Q9C040 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.35■□□□□ 0.05
TRIM2Q9C040 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TRIM2Q9C040 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.35■□□□□ 0.05
TRIM2Q9C040 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRIM2Q9C040 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.35■□□□□ 0.05
TRIM2Q9C040 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.35■□□□□ 0.05
TRIM2Q9C040 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.35■□□□□ 0.05
TRIM2Q9C040 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms