Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
UPF3BQ9BZI7 PAUPAR-201ENST00000630360 2965 ntBASIC19.92■□□□□ 0.78
UPF3BQ9BZI7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 FAM197Y8-203ENST00000450145 560 ntBASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 AC018712.1-201ENST00000455767 687 ntBASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 AC136632.2-201ENST00000512891 861 ntBASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPF3BQ9BZI7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 AC079781.3-201ENST00000449110 356 ntBASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 AC008735.5-201ENST00000623544 497 ntBASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 AL513523.2-202ENST00000427283 2040 ntBASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
UPF3BQ9BZI7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
UPF3BQ9BZI7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.89■□□□□ 0.78
UPF3BQ9BZI7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPF3BQ9BZI7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms