Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH11YQ9BZA8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH11YQ9BZA8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH11YQ9BZA8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PCDH11YQ9BZA8 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDH11YQ9BZA8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH11YQ9BZA8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH11YQ9BZA8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH11YQ9BZA8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH11YQ9BZA8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDH11YQ9BZA8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDH11YQ9BZA8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDH11YQ9BZA8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDH11YQ9BZA8 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
PCDH11YQ9BZA8 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDH11YQ9BZA8 ELK1P1-201ENST00000485699 580 ntBASIC21.35■■□□□ 1.01
PCDH11YQ9BZA8 GLI4-203ENST00000517468 963 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDH11YQ9BZA8 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH11YQ9BZA8 KRT17P8-201ENST00000540749 863 ntBASIC21.35■■□□□ 1.01
PCDH11YQ9BZA8 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDH11YQ9BZA8 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PCDH11YQ9BZA8 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDH11YQ9BZA8 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PCDH11YQ9BZA8 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH11YQ9BZA8 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH11YQ9BZA8 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH11YQ9BZA8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH11YQ9BZA8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
PCDH11YQ9BZA8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH11YQ9BZA8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
PCDH11YQ9BZA8 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PCDH11YQ9BZA8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH11YQ9BZA8 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PCDH11YQ9BZA8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH11YQ9BZA8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH11YQ9BZA8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
PCDH11YQ9BZA8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH11YQ9BZA8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 AL645728.1-201ENST00000366221 2101 ntBASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 GGT4P-201ENST00000623672 1708 ntBASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 TTTY23B-201ENST00000442790 549 ntBASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 MYCLP2-201ENST00000449268 967 ntBASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 AL139010.1-201ENST00000454878 894 ntBASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDH11YQ9BZA8 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 AC123567.1-201ENST00000548294 1261 ntBASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 RAB43P1-201ENST00000561790 589 ntBASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 AC092337.1-201ENST00000568699 1129 ntBASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 APOC4-201ENST00000591600 348 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDH11YQ9BZA8 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.33■■□□□ 1
PCDH11YQ9BZA8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.33■■□□□ 1
PCDH11YQ9BZA8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDH11YQ9BZA8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDH11YQ9BZA8 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC21.33■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms