Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 OR6D1P-202ENST00000641007 5290 ntBASIC15.21■□□□□ 0.02
NPAS1Q99742 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NPAS1Q99742 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.21■□□□□ 0.02
NPAS1Q99742 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NPAS1Q99742 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
NPAS1Q99742 HLA-A-202ENST00000376806 1854 ntBASIC15.2■□□□□ 0.02
NPAS1Q99742 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.2■□□□□ 0.02
NPAS1Q99742 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NPAS1Q99742 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS1Q99742 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.2■□□□□ 0.02
NPAS1Q99742 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS1Q99742 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS1Q99742 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS1Q99742 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.2■□□□□ 0.02
NPAS1Q99742 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS1Q99742 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.2■□□□□ 0.02
NPAS1Q99742 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS1Q99742 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
NPAS1Q99742 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS1Q99742 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS1Q99742 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.2■□□□□ 0.02
NPAS1Q99742 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.2■□□□□ 0.02
NPAS1Q99742 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.2■□□□□ 0.02
NPAS1Q99742 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NPAS1Q99742 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.2■□□□□ 0.02
NPAS1Q99742 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS1Q99742 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
NPAS1Q99742 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS1Q99742 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS1Q99742 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.2■□□□□ 0.02
NPAS1Q99742 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS1Q99742 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.2■□□□□ 0.02
NPAS1Q99742 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.2■□□□□ 0.02
NPAS1Q99742 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
NPAS1Q99742 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.2■□□□□ 0.02
NPAS1Q99742 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
NPAS1Q99742 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS1Q99742 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.2■□□□□ 0.02
NPAS1Q99742 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS1Q99742 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS1Q99742 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS1Q99742 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.2■□□□□ 0.02
NPAS1Q99742 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS1Q99742 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS1Q99742 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS1Q99742 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS1Q99742 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS1Q99742 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS1Q99742 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NPAS1Q99742 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS1Q99742 PCDHA14-201ENST00000506751 2298 ntBASIC15.19■□□□□ 0.02
NPAS1Q99742 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS1Q99742 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS1Q99742 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS1Q99742 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS1Q99742 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS1Q99742 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
NPAS1Q99742 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NPAS1Q99742 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.19■□□□□ 0.02
NPAS1Q99742 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.19■□□□□ 0.02
NPAS1Q99742 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.19■□□□□ 0.02
NPAS1Q99742 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NPAS1Q99742 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS1Q99742 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.19■□□□□ 0.02
NPAS1Q99742 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.19■□□□□ 0.02
NPAS1Q99742 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.19■□□□□ 0.02
NPAS1Q99742 AC087641.1-201ENST00000557561 1021 ntBASIC15.19■□□□□ 0.02
NPAS1Q99742 PDPK2P-202ENST00000562415 1191 ntBASIC15.19■□□□□ 0.02
NPAS1Q99742 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.19■□□□□ 0.02
NPAS1Q99742 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.19■□□□□ 0.02
NPAS1Q99742 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS1Q99742 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.19■□□□□ 0.02
NPAS1Q99742 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS1Q99742 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NPAS1Q99742 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS1Q99742 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS1Q99742 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
NPAS1Q99742 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS1Q99742 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS1Q99742 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS1Q99742 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.19■□□□□ 0.02
NPAS1Q99742 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS1Q99742 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.19■□□□□ 0.02
NPAS1Q99742 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPAS1Q99742 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
NPAS1Q99742 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
NPAS1Q99742 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.18■□□□□ 0.02
NPAS1Q99742 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPAS1Q99742 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.18■□□□□ 0.02
NPAS1Q99742 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.18■□□□□ 0.02
NPAS1Q99742 PCDHB19P-201ENST00000570871 2371 ntBASIC15.18■□□□□ 0.02
NPAS1Q99742 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NPAS1Q99742 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPAS1Q99742 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.18■□□□□ 0.02
NPAS1Q99742 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPAS1Q99742 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPAS1Q99742 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPAS1Q99742 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NPAS1Q99742 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPAS1Q99742 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms