Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BBS4Q96RK4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
BBS4Q96RK4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.84■□□□□ 0.13
BBS4Q96RK4 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
BBS4Q96RK4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
BBS4Q96RK4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.83■□□□□ 0.13
BBS4Q96RK4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.83■□□□□ 0.13
BBS4Q96RK4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
BBS4Q96RK4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
BBS4Q96RK4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.83■□□□□ 0.13
BBS4Q96RK4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
BBS4Q96RK4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.83■□□□□ 0.13
BBS4Q96RK4 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
BBS4Q96RK4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BBS4Q96RK4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BBS4Q96RK4 PCDHB19P-201ENST00000570871 2371 ntBASIC15.83■□□□□ 0.12
BBS4Q96RK4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
BBS4Q96RK4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BBS4Q96RK4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
BBS4Q96RK4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
BBS4Q96RK4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.83■□□□□ 0.12
BBS4Q96RK4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.83■□□□□ 0.12
BBS4Q96RK4 PMS2P1-201ENST00000431037 1228 ntBASIC15.83■□□□□ 0.12
BBS4Q96RK4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.83■□□□□ 0.12
BBS4Q96RK4 AC108073.2-201ENST00000464002 357 ntBASIC15.83■□□□□ 0.12
BBS4Q96RK4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
BBS4Q96RK4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.83■□□□□ 0.12
BBS4Q96RK4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.83■□□□□ 0.12
BBS4Q96RK4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.83■□□□□ 0.12
BBS4Q96RK4 AC107918.2-201ENST00000530817 355 ntBASIC15.83■□□□□ 0.12
BBS4Q96RK4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.83■□□□□ 0.12
BBS4Q96RK4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.83■□□□□ 0.12
BBS4Q96RK4 AC005412.3-201ENST00000580309 715 ntBASIC15.83■□□□□ 0.12
BBS4Q96RK4 MIR4492-201ENST00000581627 80 ntBASIC15.83■□□□□ 0.12
BBS4Q96RK4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.83■□□□□ 0.12
BBS4Q96RK4 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.83■□□□□ 0.12
BBS4Q96RK4 AC117500.6-201ENST00000624871 588 ntBASIC15.83■□□□□ 0.12
BBS4Q96RK4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.83■□□□□ 0.12
BBS4Q96RK4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.83■□□□□ 0.12
BBS4Q96RK4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.83■□□□□ 0.12
BBS4Q96RK4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BBS4Q96RK4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.83■□□□□ 0.12
BBS4Q96RK4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
BBS4Q96RK4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
BBS4Q96RK4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BBS4Q96RK4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
BBS4Q96RK4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
BBS4Q96RK4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
BBS4Q96RK4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
BBS4Q96RK4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
BBS4Q96RK4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
BBS4Q96RK4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
BBS4Q96RK4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
BBS4Q96RK4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BBS4Q96RK4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.82■□□□□ 0.12
BBS4Q96RK4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BBS4Q96RK4 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BBS4Q96RK4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.82■□□□□ 0.12
BBS4Q96RK4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BBS4Q96RK4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
BBS4Q96RK4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BBS4Q96RK4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.82■□□□□ 0.12
BBS4Q96RK4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BBS4Q96RK4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.82■□□□□ 0.12
BBS4Q96RK4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
BBS4Q96RK4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BBS4Q96RK4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BBS4Q96RK4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BBS4Q96RK4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
BBS4Q96RK4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BBS4Q96RK4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
BBS4Q96RK4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.82■□□□□ 0.12
BBS4Q96RK4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.82■□□□□ 0.12
BBS4Q96RK4 AC004790.2-201ENST00000623588 572 ntBASIC15.82■□□□□ 0.12
BBS4Q96RK4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.82■□□□□ 0.12
BBS4Q96RK4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.82■□□□□ 0.12
BBS4Q96RK4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
BBS4Q96RK4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BBS4Q96RK4 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.82■□□□□ 0.12
BBS4Q96RK4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
BBS4Q96RK4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
BBS4Q96RK4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.82■□□□□ 0.12
BBS4Q96RK4 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
BBS4Q96RK4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
BBS4Q96RK4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.82■□□□□ 0.12
BBS4Q96RK4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
BBS4Q96RK4 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
BBS4Q96RK4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
BBS4Q96RK4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
BBS4Q96RK4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
BBS4Q96RK4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
BBS4Q96RK4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
BBS4Q96RK4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BBS4Q96RK4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
BBS4Q96RK4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.81■□□□□ 0.12
BBS4Q96RK4 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BBS4Q96RK4 AC068587.6-202ENST00000641839 5619 ntBASIC15.81■□□□□ 0.12
BBS4Q96RK4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BBS4Q96RK4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
BBS4Q96RK4 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms