Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 TSPY12P-201ENST00000421279 868 ntBASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 AC098590.1-201ENST00000468126 897 ntBASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 AC142381.4-202ENST00000563973 229 ntBASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 AC109462.3-201ENST00000573934 613 ntBASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RAB3IPQ96QF0 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 AC097637.2-201ENST00000624096 1997 ntBASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 SSR4P1-203ENST00000599569 2260 ntBASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 CRYGFP-201ENST00000418459 633 ntBASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 GCSHP5-201ENST00000443090 522 ntBASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 AL023803.3-201ENST00000615559 522 ntBASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 GGT3P-204ENST00000453783 1664 ntBASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RAB3IPQ96QF0 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms