Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 AC142381.1-201ENST00000426099 345 ntBASIC18.01■□□□□ 0.47
PGBD4Q96DM1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 PRYP6-201ENST00000514804 343 ntBASIC18.01■□□□□ 0.47
PGBD4Q96DM1 IGHV3-42-201ENST00000520410 361 ntBASIC18.01■□□□□ 0.47
PGBD4Q96DM1 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 AC069120.2-201ENST00000524091 540 ntBASIC18.01■□□□□ 0.47
PGBD4Q96DM1 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 AL158211.3-201ENST00000607385 239 ntBASIC18.01■□□□□ 0.47
PGBD4Q96DM1 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PGBD4Q96DM1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18■□□□□ 0.47
PGBD4Q96DM1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PGBD4Q96DM1 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18■□□□□ 0.47
PGBD4Q96DM1 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18■□□□□ 0.47
PGBD4Q96DM1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18■□□□□ 0.47
PGBD4Q96DM1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PGBD4Q96DM1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PGBD4Q96DM1 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PGBD4Q96DM1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18■□□□□ 0.47
PGBD4Q96DM1 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18■□□□□ 0.47
PGBD4Q96DM1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18■□□□□ 0.47
PGBD4Q96DM1 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18■□□□□ 0.47
PGBD4Q96DM1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18■□□□□ 0.47
PGBD4Q96DM1 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PGBD4Q96DM1 CD81-202ENST00000381036 880 ntTSL 3 BASIC18■□□□□ 0.47
PGBD4Q96DM1 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18■□□□□ 0.47
PGBD4Q96DM1 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18■□□□□ 0.47
PGBD4Q96DM1 TREML5P-201ENST00000421694 576 ntBASIC18■□□□□ 0.47
PGBD4Q96DM1 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PGBD4Q96DM1 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
PGBD4Q96DM1 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18■□□□□ 0.47
PGBD4Q96DM1 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18■□□□□ 0.47
PGBD4Q96DM1 MIR4745-201ENST00000577608 62 ntBASIC18■□□□□ 0.47
PGBD4Q96DM1 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18■□□□□ 0.47
PGBD4Q96DM1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18■□□□□ 0.47
PGBD4Q96DM1 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18■□□□□ 0.47
PGBD4Q96DM1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PGBD4Q96DM1 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
PGBD4Q96DM1 FO538757.1-201ENST00000623083 1397 ntBASIC18■□□□□ 0.47
PGBD4Q96DM1 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18■□□□□ 0.47
PGBD4Q96DM1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PGBD4Q96DM1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PGBD4Q96DM1 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18■□□□□ 0.47
PGBD4Q96DM1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PGBD4Q96DM1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PGBD4Q96DM1 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 KRT8P39-201ENST00000396270 1433 ntBASIC17.99■□□□□ 0.47
PGBD4Q96DM1 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 RARRES2P9-201ENST00000565168 469 ntBASIC17.99■□□□□ 0.47
PGBD4Q96DM1 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms