Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 KRT8P39-201ENST00000396270 1433 ntBASIC15.9■□□□□ 0.14
LRRC58Q96CX6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
LRRC58Q96CX6 AC144831.1-201ENST00000573312 2656 ntBASIC15.9■□□□□ 0.14
LRRC58Q96CX6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 NSUN5P1-202ENST00000421140 1535 ntBASIC15.89■□□□□ 0.13
LRRC58Q96CX6 NSUN5P2-203ENST00000457352 1529 ntBASIC15.89■□□□□ 0.13
LRRC58Q96CX6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 DBET-201ENST00000630918 3363 ntBASIC15.89■□□□□ 0.13
LRRC58Q96CX6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 MST1L-201ENST00000442552 2185 ntBASIC15.89■□□□□ 0.13
LRRC58Q96CX6 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 KRT17P6-201ENST00000453795 1220 ntBASIC15.89■□□□□ 0.13
LRRC58Q96CX6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 AL049597.2-201ENST00000565575 961 ntBASIC15.89■□□□□ 0.13
LRRC58Q96CX6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 AL353135.1-201ENST00000606729 504 ntBASIC15.89■□□□□ 0.13
LRRC58Q96CX6 AL590326.2-201ENST00000625139 305 ntBASIC15.89■□□□□ 0.13
LRRC58Q96CX6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 AP005117.1-202ENST00000581724 1908 ntBASIC15.89■□□□□ 0.13
LRRC58Q96CX6 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 AC079776.2-201ENST00000641154 1609 ntBASIC15.89■□□□□ 0.13
LRRC58Q96CX6 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 KRT18P1-202ENST00000452408 1331 ntBASIC15.89■□□□□ 0.13
LRRC58Q96CX6 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
LRRC58Q96CX6 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC58Q96CX6 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC58Q96CX6 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
LRRC58Q96CX6 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC58Q96CX6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC58Q96CX6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC58Q96CX6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC58Q96CX6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC58Q96CX6 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC58Q96CX6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC58Q96CX6 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.88■□□□□ 0.13
LRRC58Q96CX6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.88■□□□□ 0.13
LRRC58Q96CX6 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC58Q96CX6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC58Q96CX6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC58Q96CX6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC58Q96CX6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC58Q96CX6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC58Q96CX6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LRRC58Q96CX6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRC58Q96CX6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
LRRC58Q96CX6 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms