Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 MIR4469-201ENST00000583919 79 ntBASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 AC068137.2-201ENST00000605408 478 ntBASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 ACTL9-202ENST00000612068 1252 ntBASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 ELL2P1-201ENST00000413990 1906 ntBASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SH3KBP1Q96B97 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 FRMD8P1-201ENST00000440433 1524 ntBASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 AC254562.1-201ENST00000417586 456 ntBASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 CEND1P1-201ENST00000451006 455 ntBASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 SNHG9-202ENST00000564014 471 ntBASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.52■□□□□ 0.24
SH3KBP1Q96B97 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SH3KBP1Q96B97 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SH3KBP1Q96B97 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.52■□□□□ 0.23
SH3KBP1Q96B97 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SH3KBP1Q96B97 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.52■□□□□ 0.23
SH3KBP1Q96B97 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.52■□□□□ 0.23
SH3KBP1Q96B97 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SH3KBP1Q96B97 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.52■□□□□ 0.23
SH3KBP1Q96B97 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SH3KBP1Q96B97 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SH3KBP1Q96B97 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SH3KBP1Q96B97 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SH3KBP1Q96B97 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SH3KBP1Q96B97 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.52■□□□□ 0.23
SH3KBP1Q96B97 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.52■□□□□ 0.23
SH3KBP1Q96B97 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.52■□□□□ 0.23
SH3KBP1Q96B97 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SH3KBP1Q96B97 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 FAM58CP-201ENST00000435741 640 ntBASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 DNAJB3-202ENST00000449667 1266 ntBASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 ALG1L5P-201ENST00000482043 771 ntBASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 AC124947.2-201ENST00000547118 1133 ntBASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 AC005412.3-201ENST00000580309 715 ntBASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.51■□□□□ 0.23
SH3KBP1Q96B97 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms