Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 AC015911.4-201ENST00000588022 1070 ntBASIC16.69■□□□□ 0.26
CHD5Q8TDI0 AC004835.2-201ENST00000603762 682 ntBASIC16.69■□□□□ 0.26
CHD5Q8TDI0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 AC092580.3-201ENST00000430932 139 ntBASIC16.69■□□□□ 0.26
CHD5Q8TDI0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 RNA5SP410-201ENST00000516285 106 ntBASIC16.69■□□□□ 0.26
CHD5Q8TDI0 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 AC024267.1-201ENST00000582320 895 ntBASIC16.69■□□□□ 0.26
CHD5Q8TDI0 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 PCDHA14-201ENST00000506751 2298 ntBASIC16.69■□□□□ 0.26
CHD5Q8TDI0 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHD5Q8TDI0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHD5Q8TDI0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHD5Q8TDI0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CHD5Q8TDI0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHD5Q8TDI0 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHD5Q8TDI0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHD5Q8TDI0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHD5Q8TDI0 HLA-H-201ENST00000383620 1096 ntBASIC16.68■□□□□ 0.26
CHD5Q8TDI0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.68■□□□□ 0.26
CHD5Q8TDI0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHD5Q8TDI0 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHD5Q8TDI0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.68■□□□□ 0.26
CHD5Q8TDI0 LINC00628-201ENST00000628516 1289 ntBASIC16.68■□□□□ 0.26
CHD5Q8TDI0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.68■□□□□ 0.26
CHD5Q8TDI0 AC005622.1-201ENST00000636801 1703 ntBASIC16.68■□□□□ 0.26
CHD5Q8TDI0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.68■□□□□ 0.26
CHD5Q8TDI0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHD5Q8TDI0 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.68■□□□□ 0.26
CHD5Q8TDI0 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHD5Q8TDI0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.68■□□□□ 0.26
CHD5Q8TDI0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHD5Q8TDI0 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.68■□□□□ 0.26
CHD5Q8TDI0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CHD5Q8TDI0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
CHD5Q8TDI0 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHD5Q8TDI0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHD5Q8TDI0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHD5Q8TDI0 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHD5Q8TDI0 AC026150.2-201ENST00000564693 1156 ntBASIC16.68■□□□□ 0.26
CHD5Q8TDI0 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.68■□□□□ 0.26
CHD5Q8TDI0 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.68■□□□□ 0.26
CHD5Q8TDI0 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHD5Q8TDI0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CHD5Q8TDI0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHD5Q8TDI0 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHD5Q8TDI0 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHD5Q8TDI0 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHD5Q8TDI0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.67■□□□□ 0.26
CHD5Q8TDI0 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.67■□□□□ 0.26
CHD5Q8TDI0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHD5Q8TDI0 AC008677.1-201ENST00000519230 1561 ntBASIC16.67■□□□□ 0.26
CHD5Q8TDI0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHD5Q8TDI0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHD5Q8TDI0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHD5Q8TDI0 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.67■□□□□ 0.26
CHD5Q8TDI0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.67■□□□□ 0.26
CHD5Q8TDI0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CHD5Q8TDI0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CHD5Q8TDI0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms